Gene Shel_17570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17570 
Symbol 
ID8395647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1986705 
End bp1987400 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content60% 
IMG OID644986511 
Producthypothetical protein 
Protein accessionYP_003144125 
Protein GI257064453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.526889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATA TTCCGGAAAC ATTGCTGCAG GCTGTCAAGC CGATTACCGT CATCGTCGGT 
CACTACGGCG TAGGCAAGAC CAACTTCTCG CTGAACCTTG CTCTGGACCT GGTCCAGAGC
GGGCGTTCGG TGACGTTGGT CGACCTGGAC GTGGTGAACC CCTACTTCCG CGCGACGGAA
AGCCGAACGC TTCTGGAGGA ACACGGCGTC AATCTCATCG CCCCCGTGTT CGCCGAGGCC
GGCTCGAGCC TTGACGTCCC GAGCCTGACC GGCAAGATAA TCCCGGCCAT CAACCGAGCC
GGCGAGGACC ACATCGTGCT GTTGGACGTG GGCGGCGACG ACGCAGGCGC CACGGCCCTC
GGCCGCTTCT CCCGAAACAT CGCCGAGCGT GACCACGCCG TCTTCTATGT GCTTAACAAG
TTCAGGAACC TGGTCCAGAA TCCGGCAGAC GCCGTGGAGA ACCTGCGCGA AGTGGAGGCC
GCGGCCCGCC TGAAAGCCAC GGCGTTGGTC AACAACTCGC ATCTCAAGGC GTCGACGACC
GCCGAGACCA TCGCGGAGGG CATCGCATAT GCCCAAGAAG TAGCAAACCA GGCGATGCTT
CCCCTGGTTT GCACGACCGC TTCTCCGAAT GTCGACATAT CTGCGGTAGA AAACAGGTAT
TCTGTCAAGA TGTATGTTCG CACTCCATGG GAGTAA
 
Protein sequence
MANIPETLLQ AVKPITVIVG HYGVGKTNFS LNLALDLVQS GRSVTLVDLD VVNPYFRATE 
SRTLLEEHGV NLIAPVFAEA GSSLDVPSLT GKIIPAINRA GEDHIVLLDV GGDDAGATAL
GRFSRNIAER DHAVFYVLNK FRNLVQNPAD AVENLREVEA AARLKATALV NNSHLKASTT
AETIAEGIAY AQEVANQAML PLVCTTASPN VDISAVENRY SVKMYVRTPW E