Gene Shel_17550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17550 
Symbol 
ID8395645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1984204 
End bp1984806 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content59% 
IMG OID644986509 
Productputative transcriptional regulator with cupin domain 
Protein accessionYP_003144123 
Protein GI257064451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0466174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCA CCAACATCAA GCAAGCCGCA GATCGCATCC GTGCGCTCCG CGAGGATCTT 
GGTCTGTCCA TGCAGGAAAT GGCAACTGCC ACGGGCCGCA CCCTTGCCGA ATACGCGGCG
CAGGAATCGG GAGAAACGGA TCTTTCCTTC ACGTTCCTGC ACAAATGCGC AAAGGAACTG
GGCGTTGACG TCGTCGAGTT GCTGACGGGC GAAACGCCGC ACCTGACCGG ATGCTCCCTC
GTTCGCAAGA GCGAAGGCCT TTCCATCCAG CGCAAGGGTA GCTTCGAATA CCTGCATAAG
GCACCGAACC TCAGGCACCG CCTGGCTGAA CCGTTCCTGG TTACCCAACC CTACGAGGAG
GAAGAGCAGG GCAAGCCCAT CCACCTCTCC TATCATGAGG GCCAGGAGCT CGACTACATC
ATCTCCGGCC GCATGCGCTT CGCATACGAA GACGGCGGCG ATGTCGCCAT CGAAGAACTC
GGTCCCGGCG ACCTTCTCAT GTACGACTCC GGCAAAGGCC ACGGCATGAT TGCCATCGAA
GGCGAGCCAG TCGTATTCCT CGCTATCGTA ATGAAGCCCG AAGGGAACGC AGGCATTATC
TAG
 
Protein sequence
MEITNIKQAA DRIRALREDL GLSMQEMATA TGRTLAEYAA QESGETDLSF TFLHKCAKEL 
GVDVVELLTG ETPHLTGCSL VRKSEGLSIQ RKGSFEYLHK APNLRHRLAE PFLVTQPYEE
EEQGKPIHLS YHEGQELDYI ISGRMRFAYE DGGDVAIEEL GPGDLLMYDS GKGHGMIAIE
GEPVVFLAIV MKPEGNAGII