Gene Shel_17520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17520 
Symbol 
ID8395642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1980991 
End bp1981329 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content53% 
IMG OID644986506 
Producttranscriptional regulator, PadR family 
Protein accessionYP_003144120 
Protein GI257064448 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.311111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGAG CGGCGAAAAG CGGAGCACTT ACCGAGTCCG TCTTCTATAT TCTTCTGCGG 
CTTCACCGTC CGGCACATGG GTACGCCTTG ATGAAGGAGA TCTCGCAGAT GACGAACGGC
CGGGTCAATC TGGGTGCAGG GTCTTTGTAC GGAGCGTTGG ACGCGTTGCA GAAGAAGGGC
TGGATTAAGG CGTTGGACGA ACATCCGACG GACAGAAAGG TCGAGTACAT AATCACGGAT
ACAGGTAAGC AGTTCTTTGA GAAGGAACTT GATCGTTTGG AAGAGATGCT GACGAACGCA
TCGAATATGA AGGAGGCGAC CGATGAGGAC GACCGTTAA
 
Protein sequence
MGRAAKSGAL TESVFYILLR LHRPAHGYAL MKEISQMTNG RVNLGAGSLY GALDALQKKG 
WIKALDEHPT DRKVEYIITD TGKQFFEKEL DRLEEMLTNA SNMKEATDED DR