Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17520 |
Symbol | |
ID | 8395642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1980991 |
End bp | 1981329 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644986506 |
Product | transcriptional regulator, PadR family |
Protein accession | YP_003144120 |
Protein GI | 257064448 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.311111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGAG CGGCGAAAAG CGGAGCACTT ACCGAGTCCG TCTTCTATAT TCTTCTGCGG CTTCACCGTC CGGCACATGG GTACGCCTTG ATGAAGGAGA TCTCGCAGAT GACGAACGGC CGGGTCAATC TGGGTGCAGG GTCTTTGTAC GGAGCGTTGG ACGCGTTGCA GAAGAAGGGC TGGATTAAGG CGTTGGACGA ACATCCGACG GACAGAAAGG TCGAGTACAT AATCACGGAT ACAGGTAAGC AGTTCTTTGA GAAGGAACTT GATCGTTTGG AAGAGATGCT GACGAACGCA TCGAATATGA AGGAGGCGAC CGATGAGGAC GACCGTTAA
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Protein sequence | MGRAAKSGAL TESVFYILLR LHRPAHGYAL MKEISQMTNG RVNLGAGSLY GALDALQKKG WIKALDEHPT DRKVEYIITD TGKQFFEKEL DRLEEMLTNA SNMKEATDED DR
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