Gene Shel_17500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17500 
Symbol 
ID8395640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1979041 
End bp1980285 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content61% 
IMG OID644986504 
Productadenosylhomocysteinase 
Protein accessionYP_003144118 
Protein GI257064446 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.778784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA TTCGCGACAT CGATTTGGCG CCCTCTGGGG AGAACAAAAT CGAATGGGTG 
AAAAGGAACT GCCCGCTTCT GAGGAGTTTG GAAGAGGACT TCAGCCAAAC CCAGCCTTTT
AAGGGGATTC GCATCGCGCT ATCCATCCAT CTGGAGGCGA AGACCGCATA CCTGTGCAAG
GTCTTGGCCG CGGGCGGCGC CGAGATGTTC GTGACGGGCT CCAACCCGCT CTCCACGCAG
GACGATGTCG CGGCCGCCCT GGTCAAAGCC GGGCTGAACG TGTTCGCATG GCACGGGGCC
ACGGACCAGG AGTACAACGC GCACATCAAG GAGGCGCTGT CGCATCACGC GAACATCATC
ATCGACGACG GCGGTGATTT GGTCCATATG CTGCACACCG AGATGCAAGA CGAGCTGCAA
TACGTGATCG GCGGCTGCGA AGAGACCACC ACGGGCATCG TCCGCCTTAC GGCCATGGAC
AACGCAGGTC AGCTGCGTTT CCCCATGGTG AAGGTGAACA ACGCCGACTG CAAGCACCTG
TTCGACAACC GCTACGGCAC GGGCCAGTCC GTCTGGGACG GCATCAACCG CACCACGAAC
CTCATCGTCG CAGGCAAGAA CGTTGTCGTG GCCGGCTATG GCTGGTGCGG CAAGGGCGTG
GCCATGCGCG CGAAGGGCCT GGGCGCCAAG GTGGTCGTCA CCGAGATCGA CCCCATCAAG
GCCATCGAGG CGTATATGGA CGGCTTCGAG GTCATGCCCA TGAACGAGGC GTCCAAGATC
GGCGACTTCT TCGTCACCGT CACCGGCTGC AACGGGGTCA TCACCGAGCC CGACTTCATG
GTGATGAAGG AAGGCGCAAT CCTGTGCAAC GCGGGCCACT TCGACGTGGA AATCGACATG
AAGCGCCTGC GCGAGATCGC CGTCGAGGCG CGCGAGATGC GCAACAACAT CATGGGCTAC
ACGCTGCCCA ACGGCACGCA CGTGTACGTG CTGGCGGAAG GCAGGCTGGT GAACCTGGCC
GCCGGTGACG GGCATCCCGC GGAGATCATG GACATGAGCT TCGCCATCCA GGCGCTGTCC
GCGAAATACC TGGTCGAGCA CCAGGGCACG CTGACTGAAA AGCTCATCGA CGTGCCGCGA
GAGGTCGACC TGGAGGTCGC GCACAGGAAG CTGGCCTTCC TGGGCATTGA AATCGACACG
CTGACGCCCG AACAGGAAGC GTATCTGAAC AACTCGACGA TTTAG
 
Protein sequence
MSIIRDIDLA PSGENKIEWV KRNCPLLRSL EEDFSQTQPF KGIRIALSIH LEAKTAYLCK 
VLAAGGAEMF VTGSNPLSTQ DDVAAALVKA GLNVFAWHGA TDQEYNAHIK EALSHHANII
IDDGGDLVHM LHTEMQDELQ YVIGGCEETT TGIVRLTAMD NAGQLRFPMV KVNNADCKHL
FDNRYGTGQS VWDGINRTTN LIVAGKNVVV AGYGWCGKGV AMRAKGLGAK VVVTEIDPIK
AIEAYMDGFE VMPMNEASKI GDFFVTVTGC NGVITEPDFM VMKEGAILCN AGHFDVEIDM
KRLREIAVEA REMRNNIMGY TLPNGTHVYV LAEGRLVNLA AGDGHPAEIM DMSFAIQALS
AKYLVEHQGT LTEKLIDVPR EVDLEVAHRK LAFLGIEIDT LTPEQEAYLN NSTI