Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17480 |
Symbol | |
ID | 8395638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1976738 |
End bp | 1977652 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644986502 |
Product | sugar kinase, ribokinase |
Protein accession | YP_003144116 |
Protein GI | 257064444 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.402042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCATA CGGTTGTGAT CGGCACGACG TTCGTGGATG TCAAAGGGGT TCCGAAGGGC GCATACGACC CGCAGGGCCG CAATGTGGGC GATGTCAAAA TCGTTCACGG CGGGGTGGGG CGCAACGTTG CCGAGAACTT CGCGAACGTT GGCAAGCCGG TCTCCTTCGT GGGTACGATG GAGGATTCCG CCTTCGGTCG GGATGTTCGG CGGCGTTTGC TCGAGCGCGG TGTGAATCTG GACCATGCGC CGCAGGCTTC GGACAACGGC ATCGGCATGT GGCTGGTCAT CCTCGACGAG AACGGCGACC TTGCCGGGTC CATATCCAAA ATGCCGGAGC TGGACCTTCT GGAAGAGCAC CTTTCGCGCG AAATCGACAC CATCGCGGCC GGGGCCGACG CGATTGTTCT GGAGTTGGAC CTGAACGAGC GCATCGCCGA GGTGGTCGTG GACGCGGCGA AAAGGCATGG CAAGCCGCTG TACGCCATCG TGGGCAACAT GAGCGTCGTG CTCAGCCGAA AAGACCTGGT CAAGCAGACG GATTGCTTCA TCTGCAACGT GATCGAAGCC GCCAAGTACT TCGGCTTGGG CGCGCTGGCG GACTATTCGC CGACCCAGAT GCTGGAGTTC CTGCCCGATG CTGCTTCTCG GGAGGGCATT GCCTCCATGG TCGTCACTAT GGGCGCCGAA GGTGCGGTCT ATTTCGACGG ACGCGCCGGC AGCGCTGGCA TCTGCCCGCC GTATCCCGCC AAAATGGTAG ACAGCACCGG TGCCGGAGAC GCGTTCTTCT CGGGAACGGT CATGAAGCTT GTCGAAGGGT GTGTGCTGGC GGATGCCGTG GCTTTCGGTG CCCGCCTTGC ATCGGCGACC ATCGGAAGCG AAGAAGCCAC CTGTCCTGTC GGCGGCGGTT TCTAA
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Protein sequence | MGHTVVIGTT FVDVKGVPKG AYDPQGRNVG DVKIVHGGVG RNVAENFANV GKPVSFVGTM EDSAFGRDVR RRLLERGVNL DHAPQASDNG IGMWLVILDE NGDLAGSISK MPELDLLEEH LSREIDTIAA GADAIVLELD LNERIAEVVV DAAKRHGKPL YAIVGNMSVV LSRKDLVKQT DCFICNVIEA AKYFGLGALA DYSPTQMLEF LPDAASREGI ASMVVTMGAE GAVYFDGRAG SAGICPPYPA KMVDSTGAGD AFFSGTVMKL VEGCVLADAV AFGARLASAT IGSEEATCPV GGGF
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