Gene Shel_17370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17370 
Symbol 
ID8395627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1962757 
End bp1963512 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID644986491 
Productpyruvate-formate lyase-activating enzyme 
Protein accessionYP_003144105 
Protein GI257064433 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.519669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCT GCTCAATCGC GCTCGACCCC ATCGAGAAGA AGCCTTTGGC TCGTTTTTAT 
CCCGGTTCGC GCATCCTGAG CGTAGGCGGT GTGGGCTGCA CGCTGCACTG CCCCTGGTGC
CAAAACCACG AGATCGCGTT GCCCGAGGAT CCTTCTGCAG TGCCGACGCG CACCATAACC
CCTGATGAGC TGGCGGAGGC GGCGGCATCT TACATCCCTT ACGGCAACAT CGGCGTTGCT
TACACCTACA ACGAGCCGTT GCTCCGATGG CGGCAGGTGC TGGAATGCGC GAAGGCGGTC
AGGGCGCAGG AGGCGCCTGA CCTGGTCGGT CCCGACCATC TGGTGAACGT GCTTGTCACC
AACGGCATGG TGGGGGAAGG CCCTCTGGAG GAGCTGCTGG AGTGGATCGA CGCCTGGAAC
ATCGACCTGA AGGCATTCAC TCAGGAGGGA TACGACGTGT GCGGTGGCAA GCTCGATGTG
GTGAAGCGAA CCATCCGGCG GGCGGCGGCC TGCTCCCACG TGGAGGTGAC CACGCTGGTC
ATTCCCGGAT ACAACGACGA CATGGACGGT TTCGAGCGGG CAGCGGCGTG GCTTGCCGAT
GTGGATCCCG ACTTGACCTG GCATTTGTCG CGGTTTCATC CCGCTTACCG CTGGATGCAC
CTGCCGCGCA CTCCCTTGGA CACGCTCTAT CGGGCCCAAG AGATCGCGCG TCGCCATCTG
AACCACGTGG TTCTCGGCAA CGTGCCCCTG GCCTAG
 
Protein sequence
MEICSIALDP IEKKPLARFY PGSRILSVGG VGCTLHCPWC QNHEIALPED PSAVPTRTIT 
PDELAEAAAS YIPYGNIGVA YTYNEPLLRW RQVLECAKAV RAQEAPDLVG PDHLVNVLVT
NGMVGEGPLE ELLEWIDAWN IDLKAFTQEG YDVCGGKLDV VKRTIRRAAA CSHVEVTTLV
IPGYNDDMDG FERAAAWLAD VDPDLTWHLS RFHPAYRWMH LPRTPLDTLY RAQEIARRHL
NHVVLGNVPL A