Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17340 |
Symbol | |
ID | 8395624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1959541 |
End bp | 1960101 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986488 |
Product | cupin domain-containing protein |
Protein accession | YP_003144102 |
Protein GI | 257064430 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.224659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAG GCGAAAAGGA GATGCGCGAG ATCGGCATGC GCATCGAAGG TCTGCGCGAG GCGTGCGACG TTACGCGTGA GGAGATGGCC GAAGAGCTCG AGGTTAGCCT CGAGAAGTAC ACGCGTTGGG AAGAGACCGG CGCCGATGTA CCCATTTCCG CCATCTATCA TATCGCTTGC AAGTTCGGCG TCGAGTTCAC CGAGATCCTG ACCGGCACCG CCGCCAAGCT GGACACCTTC CAGCTGGTGC GCAAGGGTCA GGGCCGAGAG GTCGAGCGCT ATCCGGGCTA CCACTTCGAG GACCTGGCGT ACCACTACGC CGGCAAGATC ATGCAGCCGT TGGAAGTGAC CATCGACCCC TCCGACGCGC CGGCCAAGCT GGTAACCCAT TCGGGCCAGG AATTCAACCT GGTGCTGGAA GGCTCCGTCA TGGTGGTTTG GGGCGACCGC GAGTTCATCC TGAATGCCGG CGACAGCATC TACTTCAATC CGCAGATTCC GCACGGTCAG CGCTGCGCCA GCGACGTGCC CTGCAAGTTC GTCACCGTCA TCGCCGAATA G
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Protein sequence | MAKGEKEMRE IGMRIEGLRE ACDVTREEMA EELEVSLEKY TRWEETGADV PISAIYHIAC KFGVEFTEIL TGTAAKLDTF QLVRKGQGRE VERYPGYHFE DLAYHYAGKI MQPLEVTIDP SDAPAKLVTH SGQEFNLVLE GSVMVVWGDR EFILNAGDSI YFNPQIPHGQ RCASDVPCKF VTVIAE
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