Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17320 |
Symbol | |
ID | 8395622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1955202 |
End bp | 1957112 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986486 |
Product | hypothetical protein |
Protein accession | YP_003144100 |
Protein GI | 257064428 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3855] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.199854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACGA TTGACATGCA AACCCTTGAA CACTTGAGCG AAACGTATCC GACCGCGCAG GCCGCTCGCG CAGAGGCGGA AGCTAGCGCC CGGCAGCTGG CCGACCTCAA GGGCGCGGTG GTTTTCGCAT CCGACGTGCA TGGCGAATAC AACGCGTTCG ACCACATCCT GCGTAGCGGC TGCGGCTCCA TCCGCCAGAC GATCGACAGT CTGTTCGCCG ACGAGCTGAC CGAAGAGGAG CGGGCCGAAC TGGCAACGCT CGTGTACTAT CCCCGCGAGA AGGCGGAGCT GCTCCTGTCC CAGCCAGAAG ACCAGACAAC CTGGCTGGGC AAGGTGTTGC CGCAGCTGGC GGCTGTGCTG CAAGCCGTTG CCGAAGGACG CCCCGAGGCG CTTCGTCGCG AGATGCCCGA AGGTGCAGCC GACACGATCG GGGCCCTGCT TGCGGGCGAT GCTGAACCTG CTCTTAGGGC GGGCGACCCG GCGGGTATCG TGGAGGCCGT GGGCACGTTG ATCCAGCGCC TGTCGATTTC GCATTTGCAT ATGGTGGGCG ACGTGTACGA CCGCGGGCCG TCGCCGGAAC TCATCATGGA CATGATGATG GGCTACCACT CCATCGACAT CCAGTGGGGC AACCACGACG TCCTGTGGAT GGGCGCCGCT TTGGGCCAGC GGGGCTGCGT GGCCAACGTT GTGCGCATCT GCGCACGCTA CGGCAATTTC CCCATTCTGG AGGATTCCTA CGGCATCAGC ATGAAACCCC TGGTGGACTT CGCGTTGGAA ACCTACAAGG ACGACCCCTG CGTGGGCTTC GCGCCGAAGA TCAAGGGCGA TTTCACGCCC GAGGAGCTGG CCCGTTGGTC GAAGATCCAG AAGGCCATCG CATACATCCA GTTCAAGGTG GAGGCCAAGC TTATCGCCGA GAACCCGTCC TTCGGTCTGG ACGACCGCAA CCTGCTGCAC CTTATCGACC GCGAGCGCGG CACGGTGGTG GTGGACGGTG TGGAATACGA GGTCCAGGAC ATGGTGTTCC CGACGGTGGA CTGGGACGAC CCGTACCGCC TGTCGGATGA GGAATCGGCC GTGATGGATT ACCTCGAGCA GGCCTTCATG AACTGCGAGA AGCTCCAGCG CCACATCCGT TTCTTCCTGG ATGCGGGCAG CTTCTACAAA ATCTGCGGCG ACTTTCTGCT GTACCACGCG TGCGTTCCGC TGAACGCCGA CGGCTCTCTG AAGGAAGTCA CCGTGCTCGG CGAAACGTAC AAGGGCCGTT CGCTGTTCGA CGCCATGGAG CGCTACACCC GCCAAGCATT CGACGACCCT GACCCTGCCA AGCGCAAGGT CGGCCGCGAC ATGATTTGGT ACATGTGGCT CGGCCAAGGC TCGCCCCTGT TCGCGAAGAG CAAGATGGCC ACCTTCGAGA TTTACATGAT CGCCGACAAA GCCGCCCGCA AGGAGGTCAA GAACCCGTAC TACTCGCTGC TCGAGGACGA GCAGGTGCTG GCGGGCATCT TCGAGGACTT CGGCATGGAT CCGGCCGTCT CGCGCATCGT GAGCGGGCAT GTGCCGGTGA AGGTGAAGGA CGGCGAAGAT CCCGTGAAAT GCGGCGGGAA GGCCATGATC ATCGACGGCG GCTTCTCGCG TGCGTATCAG TCCGCTACGG GCATTGCCGG GTTTGCCCTG GTCAACGATG CGAACGGGTT GCGTCTGGGC TATCTGGAAC CGCTGGAGTC GCAGCAGGCC GCCATCGAGC GCAACCTGGA CATCGTGCCG AAATGGCGTA CGCTTGCCGA AAACGAATCC CCGCTACACG TGGGCGATAC CGAATACGGC CTGGTACTGC GCGACAAGAT CGATGCACTG ACTCGCTTGG CCGAAGCCTA CGAGGCGGGC GATATGCCCG AGCGCGCGTA A
|
Protein sequence | MTTIDMQTLE HLSETYPTAQ AARAEAEASA RQLADLKGAV VFASDVHGEY NAFDHILRSG CGSIRQTIDS LFADELTEEE RAELATLVYY PREKAELLLS QPEDQTTWLG KVLPQLAAVL QAVAEGRPEA LRREMPEGAA DTIGALLAGD AEPALRAGDP AGIVEAVGTL IQRLSISHLH MVGDVYDRGP SPELIMDMMM GYHSIDIQWG NHDVLWMGAA LGQRGCVANV VRICARYGNF PILEDSYGIS MKPLVDFALE TYKDDPCVGF APKIKGDFTP EELARWSKIQ KAIAYIQFKV EAKLIAENPS FGLDDRNLLH LIDRERGTVV VDGVEYEVQD MVFPTVDWDD PYRLSDEESA VMDYLEQAFM NCEKLQRHIR FFLDAGSFYK ICGDFLLYHA CVPLNADGSL KEVTVLGETY KGRSLFDAME RYTRQAFDDP DPAKRKVGRD MIWYMWLGQG SPLFAKSKMA TFEIYMIADK AARKEVKNPY YSLLEDEQVL AGIFEDFGMD PAVSRIVSGH VPVKVKDGED PVKCGGKAMI IDGGFSRAYQ SATGIAGFAL VNDANGLRLG YLEPLESQQA AIERNLDIVP KWRTLAENES PLHVGDTEYG LVLRDKIDAL TRLAEAYEAG DMPERA
|
| |