| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_17290 |
|---|
| Symbol | |
|---|
| ID | 8395619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1953251 |
|---|
| End bp | 1953895 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644986483 |
|---|
| Product | Protein of unknown function (DUF548) |
|---|
| Protein accession | YP_003144097 |
|---|
| Protein GI | 257064425 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.559869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGATG TGGAACTGCA TAGGGAGCCC GAAGGGCTCA CGCTCGTCGG CGACGGCATG
TCGTTGCGGG GCGATTTCAC GCGGCTGCTC CCCCGTCTTA AACCCGGCAC CGTGCAACGC
GAGCTGCTGG TCAAAGCTGC AAAGGTGAAA GGCGTGGACG CTCCTGTGGC CGTGGACGCC
ACCGCTGGAC TCGGCGAGGA TTCGCTTTTG CTGGCCGCCG CGGGGTTCAC AGTATATATG
TATGAGAGGG ACGAGGTCAT TTTCGCCCTG CTGGAAGACG CCTTGGACCG CGCCGCGCAG
GTGCCGCAGT TGGCCGACAT CGTCCGCCGC ATGCACCTGA CCCAAGGCGA TAGCGTGCAG
GCTCTTGCCC ACCTGGATTT TCTGCCGGAC GTCGTCGTGT TGGACCCCAT GTTTCCCATG
CGGCAGAAAA GCGCTGTCAG CAAGAAGAAG ATGCAGCTGT TCCAGATGCT CGAGGCGCCC
TGCACCGATG AGGAGGCCCT GCTCCAGGCG GCAATCGATG CGAATCCGCG CAAGATCGTC
GTGAAACGCC CGCCGAAGGG CCCGTACCTG GCAGGCCGCA AACCCAGCCA TTCGGTTGCC
GGCAAGGCCG TCCGCTTCGA CGTCATCTCG CTGCCCCGAA TGTGA
|
|---|
| Protein sequence | MPDVELHREP EGLTLVGDGM SLRGDFTRLL PRLKPGTVQR ELLVKAAKVK GVDAPVAVDA
TAGLGEDSLL LAAAGFTVYM YERDEVIFAL LEDALDRAAQ VPQLADIVRR MHLTQGDSVQ
ALAHLDFLPD VVVLDPMFPM RQKSAVSKKK MQLFQMLEAP CTDEEALLQA AIDANPRKIV
VKRPPKGPYL AGRKPSHSVA GKAVRFDVIS LPRM
|
|---|
| |