Gene Shel_17200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17200 
Symbol 
ID8395610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1942805 
End bp1944319 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content62% 
IMG OID644986474 
Productnon-ribosomal peptide synthase 
Protein accessionYP_003144088 
Protein GI257064416 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.699646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAACG TTCTTGAATG GTTGGAAGCG ACGGCGAAGC GCGTTCCGGA CAAGCCCGCC 
GTCTGCGATG TGGAATCCAC GTTGACGTAT GCCCAGTTGG AAGCTGAGGC GCGTCGCATC
GGCACCTGGT TGGCCTCTCG CGTGCAGCCT CATGTGCCGG TGGCTCTCTA TATGGAGAAG
AGCACCGAGT GCCTGGCGCT TATGTTGGGT GCGACGTATG CTCGGTGCCC CTATTCGGTC
ATCGACGTCC GGCAGCCCGC CAATCGTGTG GCTTCAATTC TGGATACGCT GCAACCGGGC
ATCGTGCTGA CGGATGCCCG CAACGCCGAG CATGCGGCGG AGATGTTCAC CGAAACGCCT
TATGAGCCTG TGCTCGCATC GTCCATCGAC GCCGTCGCAG ATGACGGGGC CATCGCCCGC
CTGCGCGCCG AGGCGCTGGA CACCGATCCG CTCTACGTCA ACTTCACCAG CGGCAGCACC
GGCACGCCGA AGGGCGTGTG CGTCGCGCAC CGTTCGGTCA TCGACTTCAT CGGGTGCTTC
ACGGACACCT TCGGCTTCAC GCAGGACGAC GAAATTGCCA ACCAGGCTCC TTTCGACTTC
GACGTGTCGG TCAAGGACCT CTACAGCGGC ATGCGCGTCG GCGCCACCGT GCACCTGATC
CCCCGCGAGT ACTTCAGCCA GCCGGCGTTG CTCATGGATT ACCTGGTGGA ACGCCGGGTG
ACCGTTTGCA CCTGGGCCGT GAGCGCCATG TGCTTCGTGT CCATCATGGG CGGATTCGAA
TACAAGGTCC CCGAAACCAT TTCGAAGGTC CTGTTCTCCG GCGAGGTCAT GCCGCCCAAG
CAGCTGGCCA AGTGGAAGAA GTATCTGCCC CATGCCATGT ATGTGAACCT GTACGGCCCC
ACCGAGGTCA CCTGCAACTG CACGTACCAT ATCGTCGACC GCGACTACGC AAAGGACGAG
ACCATTCCCG CCGGCAGGGC TTTCGACAAC GAGCGGGTGT TCCTGCTGGA TGAGGACGAC
CGCGAAGTGA CCGAGGCCGG CGAGCAGGGC GAAGTCTGCG TCTGCGGCAC GTGCCTGGCG
CTGGGCTACT ACAACGCTCC CGAACGCACG GCCAAGGCTT TCATGCAGAA CCCGCTGAAC
ACCCGTACCA TCGAGATGAT GTACCGCACC GGCGACATCG CGACGTGGAC CGAAGAAGGC
GAGCTCATGT ACGTGGGTCG CAAAGACCAC CAGATCAAAC ATCTGGGGCA GCGCATCGAG
CTGGGCGAGA TTGAAACGGC TGCCCAGGCC TTGGATGGCA TCACCCGCGC ATGCTGCGTC
TACAACGCCC GCAAGAAGCG CATCCTCATG TTCTATACTG GGTCCATCGG TTCCGACGAG
CTGCTGGAAG GCATGCGTGC CGTGGTGCCG CAGTACATGG TGCCCAGCAA GGTGTTCCAG
CTTGACGAGA TGCCCATGAC CAAGAACGGC AAGGTAGACC GTAACGCGCT TGCCCAGATG
AAGGGAGCCA ACTGA
 
Protein sequence
MKNVLEWLEA TAKRVPDKPA VCDVESTLTY AQLEAEARRI GTWLASRVQP HVPVALYMEK 
STECLALMLG ATYARCPYSV IDVRQPANRV ASILDTLQPG IVLTDARNAE HAAEMFTETP
YEPVLASSID AVADDGAIAR LRAEALDTDP LYVNFTSGST GTPKGVCVAH RSVIDFIGCF
TDTFGFTQDD EIANQAPFDF DVSVKDLYSG MRVGATVHLI PREYFSQPAL LMDYLVERRV
TVCTWAVSAM CFVSIMGGFE YKVPETISKV LFSGEVMPPK QLAKWKKYLP HAMYVNLYGP
TEVTCNCTYH IVDRDYAKDE TIPAGRAFDN ERVFLLDEDD REVTEAGEQG EVCVCGTCLA
LGYYNAPERT AKAFMQNPLN TRTIEMMYRT GDIATWTEEG ELMYVGRKDH QIKHLGQRIE
LGEIETAAQA LDGITRACCV YNARKKRILM FYTGSIGSDE LLEGMRAVVP QYMVPSKVFQ
LDEMPMTKNG KVDRNALAQM KGAN