Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17130 |
Symbol | |
ID | 8395603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1933164 |
End bp | 1934714 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986467 |
Product | 4Fe-4S protein |
Protein accession | YP_003144081 |
Protein GI | 257064409 |
COG category | [C] Energy production and conversion |
COG ID | [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.29858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGGAA TGAGCCGCAG GAATTTTTTG CGTGGCATGG GCGTTATGGG AGCCGCCGGT GCTGCAGCTG CGTTGACCGG TTGCGCGTCG GGCGCTGCTG CCGGTGACGC CAAAGAAGCC GCCGCCGAAA GCACGGGCAC CGAGGTCAAG CTGAGCGACG GCACCGTTTG GTACGGCACT CCCCGCGAGA TCGTCGAGAA GGGCGGCTCC ACCATGCCGC TCGAGGAGCT GACCCGCCGC CGCAAGGAGT ACGTGGACTC CCAGACCGAG TTCACGGCCG AGGACGGAAC GGTTGTTCCG GCCCCGTATG TGAAGATGCG CGCCCTGGTG CACAGCTACG GCTTGGGCGG CGGCGAAGGC GCCATGACCA AGAGCATGTT CAGCCGCGTC ATGGACCAGT TCACTGAAGA GGAAGTCGAA GCCTACCTGC AGATGCCCTG GGACCGCAAG TTCACGGCGA ACGAGTACTA CTACAAGTGC CAGGTGGAAG GCATCGACCG CACCTACGAA GAGTGCAAGG AGATCTGCGA GAAGTTCAGC AAGGCCGGCT TCCTGCCGTT CCGCACCATC AACGAGGGCC GCACGTACAA CATCCCCTCC ATCGCGCCCG AAGGCATCAT CACCTACAGC TACTGCGAAG AGTTCTATGA GGATCCATAC AGCTTCGAGT GGCCCTTCAC CAACTGGGAC CTGGGCGGCG ACTACGCCCT CGAAGGCACA GCGTGCTACC TGTCGGTGCC GCTGAACAAG GACATCATGG CCGAAGGCAG CCAGATCCTG GCCTACGACG ACGTGCGCCA GATGCTCGCC GACCACGAGT ACTTCGCACT GCAGCCCTGC TCCTGCCGTT ACGAGACGTT CGCCTACGAG TGGTATGAGG AGCATGGCCT GGACGGCGAG AAGTTCCCGA CGTTCACCGA CTTCATGACC GGCGATTTCA CCGATTTCAC CGACAACAAC GGCGACGTCA TCGAGACGTG CCTGACCATG GGCGACGACG CCGAGTACCT GGTCTCGCTG GGCCTTGCAC GCCGCGTCGA TCTGGAAGAG GCCCTCGAGG TCATCGACGC CCGCGTCGAA GAAGGCTGCA TCATCCACTG CCTGCACGGC AAGGAGCATG CATGGGTGTG CTTCTGCAAC CCCAAGACCT GCGGCATCAT CGCACAGTGG GAGAACGGCA AAGAGGCTCT GGGCGGCTGG GACGTGCTCG AAGAGAAGTC CATCGCCTTC AACCACCGCT CGCACTACAG CCTCGAGGTC GATGCCAACA AGTGCATCGC CTGCGGCACA TGCGCAGGTC GCTGCCCCAT GGGCGCCATC TCGATGGACA CGGGCGTGCC GGTGGTCACC AGCTACCTGT GCCGTATCTG CGGCCAGTGC TGCTACGTGT GCCCGCAGGA GGCCCGCAAG CTTGCCAACC GTCCGATCGA CGACTTCATC GAGCTTCCGC ACCAGATGGA AGACGACAAC AACCTCAAGG CTGCGTTCCG TTTCGAGCAT GGCCTGGTCG GTCGCGGCGA GACTCCCTCC ATCGACGCCT ACATCGAGTA G
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Protein sequence | MMGMSRRNFL RGMGVMGAAG AAAALTGCAS GAAAGDAKEA AAESTGTEVK LSDGTVWYGT PREIVEKGGS TMPLEELTRR RKEYVDSQTE FTAEDGTVVP APYVKMRALV HSYGLGGGEG AMTKSMFSRV MDQFTEEEVE AYLQMPWDRK FTANEYYYKC QVEGIDRTYE ECKEICEKFS KAGFLPFRTI NEGRTYNIPS IAPEGIITYS YCEEFYEDPY SFEWPFTNWD LGGDYALEGT ACYLSVPLNK DIMAEGSQIL AYDDVRQMLA DHEYFALQPC SCRYETFAYE WYEEHGLDGE KFPTFTDFMT GDFTDFTDNN GDVIETCLTM GDDAEYLVSL GLARRVDLEE ALEVIDARVE EGCIIHCLHG KEHAWVCFCN PKTCGIIAQW ENGKEALGGW DVLEEKSIAF NHRSHYSLEV DANKCIACGT CAGRCPMGAI SMDTGVPVVT SYLCRICGQC CYVCPQEARK LANRPIDDFI ELPHQMEDDN NLKAAFRFEH GLVGRGETPS IDAYIE
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