Gene Shel_17130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17130 
Symbol 
ID8395603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1933164 
End bp1934714 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content63% 
IMG OID644986467 
Product4Fe-4S protein 
Protein accessionYP_003144081 
Protein GI257064409 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.29858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGAA TGAGCCGCAG GAATTTTTTG CGTGGCATGG GCGTTATGGG AGCCGCCGGT 
GCTGCAGCTG CGTTGACCGG TTGCGCGTCG GGCGCTGCTG CCGGTGACGC CAAAGAAGCC
GCCGCCGAAA GCACGGGCAC CGAGGTCAAG CTGAGCGACG GCACCGTTTG GTACGGCACT
CCCCGCGAGA TCGTCGAGAA GGGCGGCTCC ACCATGCCGC TCGAGGAGCT GACCCGCCGC
CGCAAGGAGT ACGTGGACTC CCAGACCGAG TTCACGGCCG AGGACGGAAC GGTTGTTCCG
GCCCCGTATG TGAAGATGCG CGCCCTGGTG CACAGCTACG GCTTGGGCGG CGGCGAAGGC
GCCATGACCA AGAGCATGTT CAGCCGCGTC ATGGACCAGT TCACTGAAGA GGAAGTCGAA
GCCTACCTGC AGATGCCCTG GGACCGCAAG TTCACGGCGA ACGAGTACTA CTACAAGTGC
CAGGTGGAAG GCATCGACCG CACCTACGAA GAGTGCAAGG AGATCTGCGA GAAGTTCAGC
AAGGCCGGCT TCCTGCCGTT CCGCACCATC AACGAGGGCC GCACGTACAA CATCCCCTCC
ATCGCGCCCG AAGGCATCAT CACCTACAGC TACTGCGAAG AGTTCTATGA GGATCCATAC
AGCTTCGAGT GGCCCTTCAC CAACTGGGAC CTGGGCGGCG ACTACGCCCT CGAAGGCACA
GCGTGCTACC TGTCGGTGCC GCTGAACAAG GACATCATGG CCGAAGGCAG CCAGATCCTG
GCCTACGACG ACGTGCGCCA GATGCTCGCC GACCACGAGT ACTTCGCACT GCAGCCCTGC
TCCTGCCGTT ACGAGACGTT CGCCTACGAG TGGTATGAGG AGCATGGCCT GGACGGCGAG
AAGTTCCCGA CGTTCACCGA CTTCATGACC GGCGATTTCA CCGATTTCAC CGACAACAAC
GGCGACGTCA TCGAGACGTG CCTGACCATG GGCGACGACG CCGAGTACCT GGTCTCGCTG
GGCCTTGCAC GCCGCGTCGA TCTGGAAGAG GCCCTCGAGG TCATCGACGC CCGCGTCGAA
GAAGGCTGCA TCATCCACTG CCTGCACGGC AAGGAGCATG CATGGGTGTG CTTCTGCAAC
CCCAAGACCT GCGGCATCAT CGCACAGTGG GAGAACGGCA AAGAGGCTCT GGGCGGCTGG
GACGTGCTCG AAGAGAAGTC CATCGCCTTC AACCACCGCT CGCACTACAG CCTCGAGGTC
GATGCCAACA AGTGCATCGC CTGCGGCACA TGCGCAGGTC GCTGCCCCAT GGGCGCCATC
TCGATGGACA CGGGCGTGCC GGTGGTCACC AGCTACCTGT GCCGTATCTG CGGCCAGTGC
TGCTACGTGT GCCCGCAGGA GGCCCGCAAG CTTGCCAACC GTCCGATCGA CGACTTCATC
GAGCTTCCGC ACCAGATGGA AGACGACAAC AACCTCAAGG CTGCGTTCCG TTTCGAGCAT
GGCCTGGTCG GTCGCGGCGA GACTCCCTCC ATCGACGCCT ACATCGAGTA G
 
Protein sequence
MMGMSRRNFL RGMGVMGAAG AAAALTGCAS GAAAGDAKEA AAESTGTEVK LSDGTVWYGT 
PREIVEKGGS TMPLEELTRR RKEYVDSQTE FTAEDGTVVP APYVKMRALV HSYGLGGGEG
AMTKSMFSRV MDQFTEEEVE AYLQMPWDRK FTANEYYYKC QVEGIDRTYE ECKEICEKFS
KAGFLPFRTI NEGRTYNIPS IAPEGIITYS YCEEFYEDPY SFEWPFTNWD LGGDYALEGT
ACYLSVPLNK DIMAEGSQIL AYDDVRQMLA DHEYFALQPC SCRYETFAYE WYEEHGLDGE
KFPTFTDFMT GDFTDFTDNN GDVIETCLTM GDDAEYLVSL GLARRVDLEE ALEVIDARVE
EGCIIHCLHG KEHAWVCFCN PKTCGIIAQW ENGKEALGGW DVLEEKSIAF NHRSHYSLEV
DANKCIACGT CAGRCPMGAI SMDTGVPVVT SYLCRICGQC CYVCPQEARK LANRPIDDFI
ELPHQMEDDN NLKAAFRFEH GLVGRGETPS IDAYIE