| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_17020 |
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| Symbol | |
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| ID | 8395592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1917040 |
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| End bp | 1919223 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644986456 |
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| Product | glycosidase |
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| Protein accession | YP_003144070 |
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| Protein GI | 257064398 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGTT TCGAACAGCT GAAGTGGTCG GTCGCGCACG ATCCGTGCTC GGCCCGCTTC
CGGTTGCCCC AGGGCGCGCT GCCCTTGGGC GCGTCCGTGC GGATTGTCCT GCGAGTAGAC
GAAAACGCCC GGCAGGCCGT TCGGAAGGCG AGCCTGCTCA CAGGCGAATA CGACGGGCGG
GCGCAGCGCC TCGTGTGGTG CGAGCAGTCC ATGGACGCCT GCGGCGAAGG GTATTCCGCC
GTGTTCGAGC CTACGCCGAA CCTGCACGTG GCCTATTACG CCTTCGCCAT CTATACGGCG
GATGACCTGC TGCTGTACTA CGTCCCTCGC GCCGACGGCC GCGCCACGTT CGGGGAGCTG
GTCCGTCCCG GTACCGATGG GGAATGGACC GAAGACGGCT GGCGCCCCGC GAGCGTTTCC
GACGGGGCGG ATGCGTCCTT CGGCGTGCCC GATGCTCTGG GCGGCTTTCA GGTCACGGTG
TTCGACCCGG CGTTCACCAC GCCGGATTGG TTCGCCGGAT CCGTCATGTA CCAGGCCTTT
CCCGACCGCT TCGCCCGCGG CCGAGGCGGC GTGCGTGAAG AAGGCGTCCA CAGCCACGAG
GCGCTGGGTC GTCCGGTGCA CCTGCATGCG TCCTGGGACG ACCCCGTAGA ATGGGACGAC
GTCGAAAACC CTGATGGAAT CGCGGCCTAC GACCCGGTGG ATTTCCACGG CGGCACGCTG
GAAGGCATTG CGGAAAAGCT TTCGTACCTG GCGTCGCTGG GCGTGGAGAC GCTGTATCTG
AATCCGGTGT TCGAGGCGCG GTCGAACCAT CGCTACGACA CGGCCGACTA TTTGGCAATC
GATCCTTTGC TGGGTACTGC AGAAGATTTC GAACGGCTCG TCGATGCGGC CCGTGAGCAG
GGTATATCCA TCATGCTGGA TGCGGTGCTT TCGCACACCG GCAACGACAG TCGGTACTTC
GATGCGGCGG ATGTCTACGA CGAGCCGGGT GCCGCGCAGG GACCTTCCTC ACGCTTTTAC
AGCTGGTACG ATTTCACGCC GACGGAAAGC GGCGTGCCGT ATCGGTGTTG GTGGGGGCAT
CCGACGCTGC CCGAGGTGAA CGAGCACGAC CCGTCGTGGC AGAGCTTTAT GCTGGGCGGC
CATGGCCAGC AGGGGGTGCT GCCGCATTGG CTGACCCGCG GTGCGCGGGG CTACAGGCTG
GATGTGGCCG ACGAACTTCC CGACGACGTG CTGGAGCTCA TCCGCACGTG CGTGAAGCGG
ACGGATCCCG AGGCCGTGGT GCTCGGCGAG GTGTGGGAAG ACGCCACCAC CAAGACGAGC
TACGGTTCGC CGCGAACCTA CGCGTTCGGC CGCTCGCTGG ACTGCGTGAT GAACTATCCG
ATGCGAAACG CGCTTCTGGG CTTCGCGCTC GGGTCGGTGG ACGCCCTGCA GCTGGCGACG
TTCTTGAAGC TGCAGCAGGC GAACTATCCC GCCGCCATGC ACAGGTGCCT GATGAACCTG
CTTTCCTCCC ACGATGTCGA ACGGGTGCGC AGCGTGCTGG CGCTGGGTCG CTCGCTCAAG
GATGAGGACC GTGCGGGGCA GCTTCGCTTG ACGAACGCCA TCACACCAGA TCAGGACCGT
AAAGGGGCGC GGCTGCAGCG TCTGGTGGCG GCGCTTCTGT ACGCGATTCC CGGTGTGCCG
TGCCTGTACT ACGGTGACGA GTCCGGGCTG CAGGGTGGAG GCGACCCCTT CTGCCGGCAG
ACCATGCCTT GGGGCGACGC GTCGCGGGCC GGGCGTTCCG ATTGCGGCGA GGATTTGACC
AGGTTCTACC AGGATCTGGG CCAGGTGCGC AAGGGCAGCC CCGTGCTTCG CGCGGGTCAG
ACCGCCTATG CGGCGCCTGC CTCCGACGTG CTGTGCGTGC TGCGTTGGGA CGACCGGAAC
GGAGAAACCG TGCTTGCGGT TGCGAACCAG GACGAAGCGG ACCGGCCGGC GGTCGTGGAT
TTGGCCAAGC TGGACGTGCC TCTGCCGTGC GCCCTTTCGA AGACCGTGAT GACCGAAGCG
GTCGCATGCC CCGTGCTGTT CGATTCGGAG GCGAAGGCAC GGCCATGCGC CCCGACGGCG
AATCTGTGCG ACGGTATCGT CCACGCCCAG GCGCCTGCGC TGTCCACGGT CATATTCCGG
ATTCCTGCTG GCGGGGCCCA GTAG
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| Protein sequence | MAGFEQLKWS VAHDPCSARF RLPQGALPLG ASVRIVLRVD ENARQAVRKA SLLTGEYDGR
AQRLVWCEQS MDACGEGYSA VFEPTPNLHV AYYAFAIYTA DDLLLYYVPR ADGRATFGEL
VRPGTDGEWT EDGWRPASVS DGADASFGVP DALGGFQVTV FDPAFTTPDW FAGSVMYQAF
PDRFARGRGG VREEGVHSHE ALGRPVHLHA SWDDPVEWDD VENPDGIAAY DPVDFHGGTL
EGIAEKLSYL ASLGVETLYL NPVFEARSNH RYDTADYLAI DPLLGTAEDF ERLVDAAREQ
GISIMLDAVL SHTGNDSRYF DAADVYDEPG AAQGPSSRFY SWYDFTPTES GVPYRCWWGH
PTLPEVNEHD PSWQSFMLGG HGQQGVLPHW LTRGARGYRL DVADELPDDV LELIRTCVKR
TDPEAVVLGE VWEDATTKTS YGSPRTYAFG RSLDCVMNYP MRNALLGFAL GSVDALQLAT
FLKLQQANYP AAMHRCLMNL LSSHDVERVR SVLALGRSLK DEDRAGQLRL TNAITPDQDR
KGARLQRLVA ALLYAIPGVP CLYYGDESGL QGGGDPFCRQ TMPWGDASRA GRSDCGEDLT
RFYQDLGQVR KGSPVLRAGQ TAYAAPASDV LCVLRWDDRN GETVLAVANQ DEADRPAVVD
LAKLDVPLPC ALSKTVMTEA VACPVLFDSE AKARPCAPTA NLCDGIVHAQ APALSTVIFR
IPAGGAQ
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