Gene Shel_17000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17000 
Symbol 
ID8395590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1913005 
End bp1913844 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content58% 
IMG OID644986454 
Productpolyketide biosynthesis O-methyltransferase 
Protein accessionYP_003144068 
Protein GI257064396 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3315] O-Methyltransferase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA TGCATATCGA AAAAGATACG GTTCAGGAAA CCCTGGTCAT TCCGCTGTAT 
GGCCGCAAGC TGTGCACGGA GCGGTTCCCG AGCCTGTTCC AGGACCCGAA GGCCGTTGAG
CTCATCGACA GGCTGGATTA CGATTACGAG GCCTTTGCGA CGAAAGCCTC GAAGCTGTCC
CAGGAGTTCG GAGCGCTCGA GGTTGCCATG CGCCAGACTG ACCTGGCCTT TGAGGTGCGG
GACTACCTGT CCACGCATCC GAATGCGGCC GTCGTCAACT TGGGGTGCGG CCTCGACCAA
ACGGGGGAGA ACTGCGACAA CGGAACCTGT AAGATCTACA ACGTGGATTT CCCGGACATC
ATCGAGATTC GCGACCAGCT CGTGGAGAAG AACGACCGCA CGTTCACGGT TGCCGCCGAT
CTGAACGACC TGGTCTGGTT CGATCGGATC GACGCTTCAG ACGGGGCGGT GTTCTTTGCG
GCTGGCGTGT TCTATTACTT CAAAAAGGAA GACATCCAGC GCCTGTTCAC GGCCATGGCG
AAAAGGTTTC CGGGCGGCAG GCTCGCGTTC GACGCTGCAG GGACCCGGGC TGTCAAGATC
ATGTTCAAGA CGATGGTGAA GGATGCCGGC ATCACAAGCG TCACGGATTA CTTCAGTGTG
GACGATTTGC AGCGCGACGT GGCCTCGTGG ATGATTGATG GCAAGGTGTC GTCCCGCGGC
TACATGCTCG GCTACAACGA TTTGAAGGAC CCTAGCGTGC CCGGGCTGTT CCGCCTGCTT
GCAAAAGTGG CCGACGGGTT CATGAAAATG TGCATCGTGC GCATCGACTT CAACGGGTAG
 
Protein sequence
MDKMHIEKDT VQETLVIPLY GRKLCTERFP SLFQDPKAVE LIDRLDYDYE AFATKASKLS 
QEFGALEVAM RQTDLAFEVR DYLSTHPNAA VVNLGCGLDQ TGENCDNGTC KIYNVDFPDI
IEIRDQLVEK NDRTFTVAAD LNDLVWFDRI DASDGAVFFA AGVFYYFKKE DIQRLFTAMA
KRFPGGRLAF DAAGTRAVKI MFKTMVKDAG ITSVTDYFSV DDLQRDVASW MIDGKVSSRG
YMLGYNDLKD PSVPGLFRLL AKVADGFMKM CIVRIDFNG