Gene Shel_16960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16960 
Symbol 
ID8395586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1906385 
End bp1907581 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content61% 
IMG OID644986450 
Product4Fe-4S protein 
Protein accessionYP_003144064 
Protein GI257064392 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGATG TGTTGAACTT CCTGGCGCGC TTGGAGGCTG CTCCTCTCGC TGTTGAGCAG 
CGCAGATGCG TGCGCGTCCG CAACAGGAAC GCGAAATGCA TGAGGTGTTT GGAATCCTGC
GCCGGCGGTT GCATCGGATA CGAGGACAAC GAGATCACGG TCGACCCCAC GAAGTGCATC
GGCTGCGGCA CCTGCGCTAC CGTATGCCCG ACCGATGCCA TCCATCCCAA AAAGCCTACG
GATGCGGAGC TGGCCCAGCA ATGCCTTGAT GCTGCGCGAG CCAACTCGGG CCGCGTCGTC
ATAGCATGCA AGAATATGCT CGACCGCGCA GACGGGCTTT ACGACCGTTC GAAAGTAGTG
CGGGTGCCTT GCCTGGGCCG GGTCGACGAA AGCCTCGTCC TGCATCTTGC CGTATGCGGT
GCACAATCGA TTCGCCTGGT CAGGGATGCG TGCGACGAAT GCGCGCATAA GAAGGGCTAT
GTCGCATGCC AGCATGTCTG CGCCTCTGCG AACGAGCTTC TTGAAGCATG GAACGCTCCG
CAGCGCGTAT CGACCTCGCA GAAGCTTCCT GGTTCGGTTC GTGCGCGCGA ACTGGGTTAC
GACCAGTCCC GACGTGCGTT TTTCGCGACG GTGAGGGAAG GTACCGCCGA TGCGGCATCC
GCTGCGGTCG ATACTGTGTG CGAAGACAAG CTCGGCATGG CTCCGCCGAA AGAGGACAGG
TTCGTCCATG TAGACTCCAG GGGCACGTTG CCCCATGAGG TTTCGCAGCG CCGCAAAACC
ATCATCGGCG CCCTCGATGT CCTGGAGTCC CGCTACGGCG CTCCTCTCGA CACGATGATC
GACACGCGTC TTTGGGGCGA AGTCCTTATC AACACCGACG AATGCCGTGG TTGCCGCATG
TGCGCCACGT TCTGCCCGAC CGGGGCGAAT TTCAAGTTCC AGACGAAATC GGGAAGCGTC
GGGGTCAAGC ACCGGGTGCT TCAGTGTGCG AACTGCAGGC TCTGCCTGGA CATCTGCCCC
GACAAGGCGC TGCAGCTGTC CGAAGAGGTG TTCGCACGCG ACATATCCGA CGGGGTGACC
GAGCGGTATC TGATGGGCGC ACTCCAGAGC GGCTTGGACG GTCATGATAC GATGGCTTCG
TCCATGAGAC GCCTGTTCAA CGACAATGTG AGTGTTTCCA GCTACACGAC GAACTAG
 
Protein sequence
MSDVLNFLAR LEAAPLAVEQ RRCVRVRNRN AKCMRCLESC AGGCIGYEDN EITVDPTKCI 
GCGTCATVCP TDAIHPKKPT DAELAQQCLD AARANSGRVV IACKNMLDRA DGLYDRSKVV
RVPCLGRVDE SLVLHLAVCG AQSIRLVRDA CDECAHKKGY VACQHVCASA NELLEAWNAP
QRVSTSQKLP GSVRARELGY DQSRRAFFAT VREGTADAAS AAVDTVCEDK LGMAPPKEDR
FVHVDSRGTL PHEVSQRRKT IIGALDVLES RYGAPLDTMI DTRLWGEVLI NTDECRGCRM
CATFCPTGAN FKFQTKSGSV GVKHRVLQCA NCRLCLDICP DKALQLSEEV FARDISDGVT
ERYLMGALQS GLDGHDTMAS SMRRLFNDNV SVSSYTTN