Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_16940 |
Symbol | |
ID | 8395584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1904044 |
End bp | 1905396 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644986448 |
Product | 4Fe-4S protein |
Protein accession | YP_003144062 |
Protein GI | 257064390 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACGTGA TCAGCGAGAT GAACAGCCCG AAGCTCTCAG TGCACGCCAA CCGCTGCGTC TTTGTCAGGA ACCGCAATGC CGACTGCCTG CGCTGCGCCT CGGTGTGCAC CACCGGCGCC ATTTCCAAAA GCGAAGCCGG CGTGACGGTG GACCCCGACA AATGCATTGG TTGCGGGACC TGCGCCACCG CATGCCCGAG CTGCTGCCTG GAGGCCATGA ACCCTTCGGA CGAGACCATG TTCTTCCAGA TGCGCCAGGG CCAAAAGGCC GGCGGCGGGC ATGTCGCCGT GGCCTGCAGA AACGCCCGCA TGCTGTCGGG CGCCTCCAAG GACGACGAAG GCGTATGGAC GCTGCATGAC GGCACGCCCG TCGTCTCGGT GGAATGCCTG GGTCGCGTCG ACGAGTCGGT GCTCGTGGAA ACCGTCGCCC GTGGCGCTGT ACGCATCACC TTGATCGAAG GCTCATGTTC CACCTGCGAA CACACCAAGG GGGGATCGTT CTGCAGCACC ATCCTGCAGG AGGCGAACAA CCTGCTCCGC GCATTCGACT CGGATGCCGT ACTGGAGAAG ATCCCCGTGT CCCAAGTTGA CATGCGCCAC CGCCCCTTCA CGCCCGAGGA GAAGGCGGCC GCCGCCCGTC CCGCCTACGA ATGGAAGGCA GACGCCCCCG CTGCCGACCC GCGCCGCATC CTCAACGATG TGACCAAGGC CAGCGCCGAC GTGGACACCA TCGCCGAGTA CGCCAAGCGC AACGCCGTCG CCTCGAAACG CGTGCAGCTG GAGGAGCCGG CCCTGCGCCA CGTCCAGACC GACGGCACGC TGCCCCATTT CACACCGTCG CGCAGGTTGC GTCTGTTCAA CAGCTTGAAG CACCTGGGCA TACCCACATG CGAAACAGTC AAGACGCGTT TGTGGGGACA GGTGAACATC GACACCGACA TCTGCCGCTC GTGCCGCATG TGCACGGTGT TCTGCCCCAC GGGCGCCATC AGCCGATTCG ACACGAAGGA CGACGCGTTC GGCGTCGAAC ACCGAAGCGC CCTGTGCATG CAGTGCCGCC TGTGCGAGAC CATCTGCCCC GAGCACGCTA TAACCGTGTC CGACACGGTC TCCCTCGACG AGTTCGTCAG CGGCGCCAAG ATCCGCTTCG AGATGAATCC CATCGGATGG AGCCCTTCGA GCCCGAACGC CATCGGAACG CGCTACGCAC GCTTCCTTAA GACGCCAAAC CTGCAGGACC CGCAGGCCAC GAACAAGCCT GAAGACATAC GCGAGGCCCA GGCCTTTGCA CACAAGAAAG AGGCTGCCCG CGCCAAGGCG AAGGCAGCCA GAGAGAAAAG ACAGAGCGAA TAG
|
Protein sequence | MYVISEMNSP KLSVHANRCV FVRNRNADCL RCASVCTTGA ISKSEAGVTV DPDKCIGCGT CATACPSCCL EAMNPSDETM FFQMRQGQKA GGGHVAVACR NARMLSGASK DDEGVWTLHD GTPVVSVECL GRVDESVLVE TVARGAVRIT LIEGSCSTCE HTKGGSFCST ILQEANNLLR AFDSDAVLEK IPVSQVDMRH RPFTPEEKAA AARPAYEWKA DAPAADPRRI LNDVTKASAD VDTIAEYAKR NAVASKRVQL EEPALRHVQT DGTLPHFTPS RRLRLFNSLK HLGIPTCETV KTRLWGQVNI DTDICRSCRM CTVFCPTGAI SRFDTKDDAF GVEHRSALCM QCRLCETICP EHAITVSDTV SLDEFVSGAK IRFEMNPIGW SPSSPNAIGT RYARFLKTPN LQDPQATNKP EDIREAQAFA HKKEAARAKA KAAREKRQSE
|
| |