Gene Shel_16880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16880 
Symbol 
ID8395578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1895478 
End bp1896095 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content60% 
IMG OID644986442 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003144056 
Protein GI257064384 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAT TAGCTATTGC CACCGACCTT GACCGCTGCG TCGGTTGTCT TGCATGCAGC 
GTAGCATGCA AGGTTGTCAA TGGTGTTCCG ATTGGCAACT TCTGGAACAA GACCCTTCGC
GTCGGCCCTA CGCCCAAGGA GGGCGGGTCC GGCCAGTATC CTGACGTTGA GATGTACTTC
CTCAACGTCC AGTGCCAGCA CTGCGAAAAC CCCGAATGCG TCAAGGTGTG CCCGACGGAG
GCCTCCCGCA AGATGCCCGA CGGCACCGTG CAGATCGACA AAGCCAAATG CATCGGCTGC
CAGTTCTGCG TCATGTCGTG CCCCTACGGC GTCCGCTACC TCAACGAGGA GGAAGGCGTC
GTCGAGAAGT GCACGTTGTG CCAGCAGCGC ACCGCCCAGG GCGAGCTTCC GCAATGCGTG
TCCCAGTGCT GCGGCATGGC CCGCTGGTAT GGCGACATCG AGCAGGGACT GGAATCCTTC
CAAGGTCCCC GCGGCGAAAA GCTGGGCGAT TTCCTGAACG AGTTCGACGA GTCGCAGGTG
CATAAGCTTA CCGACACGGG CAACGGCCCG AGCATGGTCT ACATCATGCG CGACATCAAA
TGGCAGGGGG TTGAATAA
 
Protein sequence
MTQLAIATDL DRCVGCLACS VACKVVNGVP IGNFWNKTLR VGPTPKEGGS GQYPDVEMYF 
LNVQCQHCEN PECVKVCPTE ASRKMPDGTV QIDKAKCIGC QFCVMSCPYG VRYLNEEEGV
VEKCTLCQQR TAQGELPQCV SQCCGMARWY GDIEQGLESF QGPRGEKLGD FLNEFDESQV
HKLTDTGNGP SMVYIMRDIK WQGVE