Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_16820 |
Symbol | |
ID | 8395572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1889915 |
End bp | 1891045 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644986436 |
Product | malate dehydrogenase (NAD) |
Protein accession | YP_003144050 |
Protein GI | 257064378 |
COG category | [C] Energy production and conversion |
COG ID | [COG2055] Malate/L-lactate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.830173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTACG TAACCTGGAG TTTGGAAACC CTCGAGCGCT TCTGCAAAGA CGTGTTCACC ACCTTCGGAT TCAGCGTCGA GGAAAGCGCC CAGATCAGCG ATGTGCTCTT GACTGCCGAT TTGTTCGGCA TCGAAAGCCA CGGCATGCAG CGCATGGTCC GCTACCACAA GGGCATCGAG AAGGGGCAGA TTCACCTGGA CGCGCAGCCC GAGGTCGTTT TCGAAACACC CATCAGCGCC ACCATCGACG GCCATTCGGC CATGGGTCAG CTGGTCAGCG TGTTCGCCAT GAAAAAGGCC ATCGAGAAGG CGAAAACCTG CGGTATCGGC ATCGTCACCG TGCGCGAGTC GAACCACTAC GGCATTGCGG GCTACTACGC CAAGATGGCT TCCGACCAGG GGCTCATCGG CTTCTCCTGC ACGAACTCCG AGGCCATTAT GGTGCCGACC TTCGCCCGCC AGGCCATGAT CGGGTCCAAC CCCATCGCCG TGGCCGTGCC CGCCGACCCC GTACCGTTCT TGTTCGACGC CTCCACCACG GTTGTGACCA GGGGCAAGCT CGAAATGTAC AACAAGATGG GCAAGCCTTT GCCCGAAGGG TGGGCGCTGG ACGAGAACGG CGTGCCCTGC AGCGAGGCCC CGCGCGTGCT ATCGAACATC GTGGGGAAGA ACGGCGGCGG CATCATGCCG CTGGGCGGTT CGTCGGAAAC CCTGGGCAGC CACAAGGGCT ACGGCTGGGG CATGGTGGCC GAACTGTTCA GCTCCATTCT TTCCCAAGGC GTGACCAGCA ACGAATGCTG CACGTTCGAG GGCAGGACAG GCATCTGCCA CGGGTTCGCG GCCATCGACC CGGCTGCTTT CGGCGACCCG GACGCCATCC GCGAGCATTT CTCCGAGTAT CTCAAGGAGC TCCGTTGCGC CCCGCTGGCC GACGGCGCCA CCCGCATTTA CACCCATGGT GAGAAGGAGG TGCTCGCCCA GGAGCATCGC CGCAAGAACG GCGTGCCCGT CAACGACGGA ACCATGGTCG AACTGCTCGA CCTGTGCGAC TACCTGAAGC TGGATTTCGC GTCTTACTTC CCGGGCTACG AGCCGCCCGC CGAGTTCGCG GGATTCGCTG GAAACTACTA G
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Protein sequence | MAYVTWSLET LERFCKDVFT TFGFSVEESA QISDVLLTAD LFGIESHGMQ RMVRYHKGIE KGQIHLDAQP EVVFETPISA TIDGHSAMGQ LVSVFAMKKA IEKAKTCGIG IVTVRESNHY GIAGYYAKMA SDQGLIGFSC TNSEAIMVPT FARQAMIGSN PIAVAVPADP VPFLFDASTT VVTRGKLEMY NKMGKPLPEG WALDENGVPC SEAPRVLSNI VGKNGGGIMP LGGSSETLGS HKGYGWGMVA ELFSSILSQG VTSNECCTFE GRTGICHGFA AIDPAAFGDP DAIREHFSEY LKELRCAPLA DGATRIYTHG EKEVLAQEHR RKNGVPVNDG TMVELLDLCD YLKLDFASYF PGYEPPAEFA GFAGNY
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