Gene Shel_16820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16820 
Symbol 
ID8395572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1889915 
End bp1891045 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content62% 
IMG OID644986436 
Productmalate dehydrogenase (NAD) 
Protein accessionYP_003144050 
Protein GI257064378 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.830173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACG TAACCTGGAG TTTGGAAACC CTCGAGCGCT TCTGCAAAGA CGTGTTCACC 
ACCTTCGGAT TCAGCGTCGA GGAAAGCGCC CAGATCAGCG ATGTGCTCTT GACTGCCGAT
TTGTTCGGCA TCGAAAGCCA CGGCATGCAG CGCATGGTCC GCTACCACAA GGGCATCGAG
AAGGGGCAGA TTCACCTGGA CGCGCAGCCC GAGGTCGTTT TCGAAACACC CATCAGCGCC
ACCATCGACG GCCATTCGGC CATGGGTCAG CTGGTCAGCG TGTTCGCCAT GAAAAAGGCC
ATCGAGAAGG CGAAAACCTG CGGTATCGGC ATCGTCACCG TGCGCGAGTC GAACCACTAC
GGCATTGCGG GCTACTACGC CAAGATGGCT TCCGACCAGG GGCTCATCGG CTTCTCCTGC
ACGAACTCCG AGGCCATTAT GGTGCCGACC TTCGCCCGCC AGGCCATGAT CGGGTCCAAC
CCCATCGCCG TGGCCGTGCC CGCCGACCCC GTACCGTTCT TGTTCGACGC CTCCACCACG
GTTGTGACCA GGGGCAAGCT CGAAATGTAC AACAAGATGG GCAAGCCTTT GCCCGAAGGG
TGGGCGCTGG ACGAGAACGG CGTGCCCTGC AGCGAGGCCC CGCGCGTGCT ATCGAACATC
GTGGGGAAGA ACGGCGGCGG CATCATGCCG CTGGGCGGTT CGTCGGAAAC CCTGGGCAGC
CACAAGGGCT ACGGCTGGGG CATGGTGGCC GAACTGTTCA GCTCCATTCT TTCCCAAGGC
GTGACCAGCA ACGAATGCTG CACGTTCGAG GGCAGGACAG GCATCTGCCA CGGGTTCGCG
GCCATCGACC CGGCTGCTTT CGGCGACCCG GACGCCATCC GCGAGCATTT CTCCGAGTAT
CTCAAGGAGC TCCGTTGCGC CCCGCTGGCC GACGGCGCCA CCCGCATTTA CACCCATGGT
GAGAAGGAGG TGCTCGCCCA GGAGCATCGC CGCAAGAACG GCGTGCCCGT CAACGACGGA
ACCATGGTCG AACTGCTCGA CCTGTGCGAC TACCTGAAGC TGGATTTCGC GTCTTACTTC
CCGGGCTACG AGCCGCCCGC CGAGTTCGCG GGATTCGCTG GAAACTACTA G
 
Protein sequence
MAYVTWSLET LERFCKDVFT TFGFSVEESA QISDVLLTAD LFGIESHGMQ RMVRYHKGIE 
KGQIHLDAQP EVVFETPISA TIDGHSAMGQ LVSVFAMKKA IEKAKTCGIG IVTVRESNHY
GIAGYYAKMA SDQGLIGFSC TNSEAIMVPT FARQAMIGSN PIAVAVPADP VPFLFDASTT
VVTRGKLEMY NKMGKPLPEG WALDENGVPC SEAPRVLSNI VGKNGGGIMP LGGSSETLGS
HKGYGWGMVA ELFSSILSQG VTSNECCTFE GRTGICHGFA AIDPAAFGDP DAIREHFSEY
LKELRCAPLA DGATRIYTHG EKEVLAQEHR RKNGVPVNDG TMVELLDLCD YLKLDFASYF
PGYEPPAEFA GFAGNY