Gene Shel_16740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16740 
Symbol 
ID8395564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1882405 
End bp1883220 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID644986428 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003144042 
Protein GI257064370 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.554101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.483834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCA GAACGTACCG GACCGAAAGC GGAACCGTGC ACTATTGGAC CGACACCACC 
GCCGGCCCGG ATGCGCCTTG GCTCGTGTTC CTACCCGGCC TTACCGCCGA CCACACGCTG
TTCGACGCGC AGATGGAACA CTTCTCCGGA AGGGCGAACT GCCTGGTGTG GGACGCGCCC
GCCCACGGGG CATCGCGCCC CTACCCGCTG GACTTCACCA TGGACGACTA CGCCTGCATC
CTCCATGACA TCCTGCAAAG CGAAGGGGCT TCGCGCCCTG TGCTGATCGG CCAGTCGCTG
GGCGGCTACG TCTCCCAGGC GTACATGGAC CTCTTCCCCG GAACCGCGGC CGGGTTCGTC
TCGATCGACT CGTCGACGCT CAAGCGGAAG TACTACCCCA CCTGGGAAGT GAAGTTCCTG
CGCCACACCA AGGGCATGTA CCTGTCCATT CCCTGGGCGC TGCTCAAACC CTGGGGCGCA
TGGGGCGCCG CCGAAACGCC GCAGGGCCGG GCCAACATGC GCTCGTTCAT GGACGGCTTC
GCCAAACGGG AATACTGCGA ACTGGCCGGG CACGGCTACC GGATGCTTGC CGACGCGCTG
GAATCGGGCC GGACGTACGA CATCGACTGC CCCGCCCTGC TGCTGTGCGG CGAAAAGGAC
CATGCCGGCG ACGTGAAGGC GTTCAATCGG GAATGGACCG CCGGCGAAGG AATCCCCCTG
GTGTGGGTGC CCGGCGCGGG CCACAACGCC AACGTCGACA ATCCGGAATT CGTGAACGTG
CAAATCGAAC GGTTCGTCGC GGGTCTGGAC GCATAG
 
Protein sequence
MDARTYRTES GTVHYWTDTT AGPDAPWLVF LPGLTADHTL FDAQMEHFSG RANCLVWDAP 
AHGASRPYPL DFTMDDYACI LHDILQSEGA SRPVLIGQSL GGYVSQAYMD LFPGTAAGFV
SIDSSTLKRK YYPTWEVKFL RHTKGMYLSI PWALLKPWGA WGAAETPQGR ANMRSFMDGF
AKREYCELAG HGYRMLADAL ESGRTYDIDC PALLLCGEKD HAGDVKAFNR EWTAGEGIPL
VWVPGAGHNA NVDNPEFVNV QIERFVAGLD A