Gene Shel_16640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16640 
Symbol 
ID8395554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1873270 
End bp1874070 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content59% 
IMG OID644986418 
Producthypothetical protein 
Protein accessionYP_003144032 
Protein GI257064360 
COG category[S] Function unknown 
COG ID[COG1433] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.836167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGATC TGGAATCACT CTTCAAGGCA CTGGGGGAAC CGACTCGCCT GAAAATCGTG 
CGCCTGCTCA CCGAGCGGCA TCACTGCGCA CGCTCGCTTT CCCAAACGTT GGGCATCAGC
GAACCGGCCG TTTCCCAGCA TATGACCGTT TTGAAACGCG TGGGGCTGGT AAGCTCCTAT
CGACATGGAT ATCACATGCA TTACGTGCTC AACACTGAGG CCTTGGCCGA GCTTTCAGAC
GAGCTACACC TGTGGCAGGA ACGCGCCGAG AATGTCCTGA GCTGCCACTC GCAGCAGGAA
TCCTGCGCGT ACCTGCTCGG CGACGGCACA AGCGGCTGCC TGTACGGCAT TGCCAATGCC
GCCGAACCCA TCGACGCAAA GAAATCAGAA ACCAATAGCG GCGAAGCCGC TCAAACCGAA
CCAGATGAAA GGACATCCAT GAGAATCGCC ATCCCCTCCG AAACCGATGC CGGCCTGCAG
AGTGTCCGCA GCGGACATTT CGGCCATGCG CCCTACTTCA CCATCGTGAC GATTGAAGAC
CGCCAGGTCA AAGATGTCGA AGTGGTCAAG AACGTCGACC ACGACCAGTA CGGCTGCGGC
GGCGTGATCC AGTACGCCCT TACCCTGGGC ATCGACGGCA TCCTGACCGT CGGCATGGGT
ATGCCTCCCT ACACCGCATT CACGAACAAC GGCATCACCG TGTACTCCGA GACCAACACC
CCCATGGTGG GCGATGTCGC CCAGCTGTTC GCACTGGGCC TGGTCATGCC CATGGATCCG
AACAAGGCCT GCAGGCACTA A
 
Protein sequence
MADLESLFKA LGEPTRLKIV RLLTERHHCA RSLSQTLGIS EPAVSQHMTV LKRVGLVSSY 
RHGYHMHYVL NTEALAELSD ELHLWQERAE NVLSCHSQQE SCAYLLGDGT SGCLYGIANA
AEPIDAKKSE TNSGEAAQTE PDERTSMRIA IPSETDAGLQ SVRSGHFGHA PYFTIVTIED
RQVKDVEVVK NVDHDQYGCG GVIQYALTLG IDGILTVGMG MPPYTAFTNN GITVYSETNT
PMVGDVAQLF ALGLVMPMDP NKACRH