Gene Shel_16430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16430 
Symbol 
ID8395533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1846319 
End bp1847455 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content62% 
IMG OID644986397 
Producthypothetical protein 
Protein accessionYP_003144011 
Protein GI257064339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.28283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.519387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCGA ACACCCACGA TATAGCCCGC AACCAGTTCA TGCTCACCGG AGGGTTGGCC 
CGCCAAGGTT ACGACTGGTG GTGGCATTCG TTCACAGGCC GCGATGCGCA GACCGGCGAA
GAGAAGCCGT TCTTCATCGA GGTATTCGCC TGCAACCCCG CCTTGGGAGG CGACGAGCCC
GTTTTCGGCC AGCTGCCTGA AAACAAGGCG GCCGGCATCA AGCCGAGCTA CGTCATGGTG
AAGGCGGGCT GCTGGGGCAA GGACGCCCGC CAGATGCATC GTTTCTTCGG ATGGAATCAA
GCGACGGTCA AAGGCGGCGT GCCGTTTTCC GTCAAGGCCG GCGACTGCTA TGCCAGCGAA
AACGTCCTTC GCGGCAGCGT CTCCGTGAGC TGCGAGGACG CCGCCGCCCA TCCCGAATGG
ATGAGCGATG CGGGCACCAT GGAATGGAAC CTGCTGTTGG ACAAGCAAAT CGCCTTCAAC
GTGGGTTACG GAGCCTCCGC ACCCATGCGC CAAGCCGAGG CCTTCGAGAT GTATTGGCAC
GTTGAAGGCA TGAAGACCCT GGTCAACGGC ACGGTTAGGC TCGATGGGCG CACCTACACG
GTGGACGGCC CCACAAGCTA CGGATACGCG GATAAGAACT GGGGCAAGAA TTTCACGAGC
CCGTGGGTGT GGCTCGCCTC CAGCCACCTG ACCAGCACGT TAACCGGCAA GTCGCTCGAA
AACAGCGCCT TCGACATCGG CGGCGGCAGG CCCAAGGTGT ACGCCATGGC CCTGCCCCAC
AAGCTGCTCG GCAGCATCGT CTACGAAGGC AAGACCTACG AGTTCAATTT CAGCAAGGCC
TGGACGGGCA GCACGACGGA ATTCGACTGC CGCGAGACCG ACGAGGACGT CGTGTGGCAC
GTAGTCCAGG ACACGCATAC GGCGCGTCTG GAAACGGATA TACGCTGCTC GAAGGCGGAT
ATGCTGCTGA TCGACTACGA AGCGCCCGAC GGGTCGAAGC GCTACAACCG ACTGTGGAAC
GGCGGCAACG GCGAAGGCCT GCTGCGCCTG TACAGCAAAA AGCACGGCGT GCTCACCCTG
ATCGACGAGA TCCTGGCGGA AAACGTGGGC TGCGAATACG GCGAATTCGA CGCCTAG
 
Protein sequence
MDSNTHDIAR NQFMLTGGLA RQGYDWWWHS FTGRDAQTGE EKPFFIEVFA CNPALGGDEP 
VFGQLPENKA AGIKPSYVMV KAGCWGKDAR QMHRFFGWNQ ATVKGGVPFS VKAGDCYASE
NVLRGSVSVS CEDAAAHPEW MSDAGTMEWN LLLDKQIAFN VGYGASAPMR QAEAFEMYWH
VEGMKTLVNG TVRLDGRTYT VDGPTSYGYA DKNWGKNFTS PWVWLASSHL TSTLTGKSLE
NSAFDIGGGR PKVYAMALPH KLLGSIVYEG KTYEFNFSKA WTGSTTEFDC RETDEDVVWH
VVQDTHTARL ETDIRCSKAD MLLIDYEAPD GSKRYNRLWN GGNGEGLLRL YSKKHGVLTL
IDEILAENVG CEYGEFDA