Gene Shel_16420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16420 
Symbol 
ID8395532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1845155 
End bp1846123 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content62% 
IMG OID644986396 
ProductF5/8 type C domain-containing protein 
Protein accessionYP_003144010 
Protein GI257064338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.504791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC AATTCTGCAC CTCCTGCGGT GCCCCCGTTC AAGAGGGGCG CAACTTCTGC 
ACCTCGTGCG GAGCACCCGT CGCGTCCGCA AACACGCAGA CCGAAGTTCG GAAGCCCTCC
ACGCAGCAGC GCATCTGCCC CAACTGCCAT GCGGCCGTTG CCGACGGCAT GCCGTTCTGC
ACCTCCTGCG GGCACTATCT GGACGCGCCG GTGGCCGCTC CCCCGACGCA GCCGACGGCA
AAGGGGCCCA ACAAGACGCT GGTCGCAGCC GTTGCGGCAG CGGTCATTAT CGTGGCAGCC
GTTGCGGCCA CCCTCGCCAT AATCCAACCT TGGGCGCACG ATGAGCCCGA TGCGAAATCC
GAGCCGGCCG TCGCCCATAA AGCCGACAAG GACGACGCCG AGACCGAAGA CGCATCCGAT
GCAACGGCCG ATTCCGACGG CGCGGCTGAT GCCACGGCCG ATTCCGAAGA AGAACCCCAG
GCAGACCCCG CAAACACGGA TGCCGCAAAG GAAGAGGCCC TCGACGCCTC CGTTCCCGCC
GTGTTCGACC ACGTGCGGGC GTCCTCCGAA CTGCCACCCG ACGAATACAA CTCCTATTAC
GGCGTGAACA ACGCCGTCGA CAACGACATG GCCACCGCTT GGAACGAGGG CAACGAGTCC
AACAACGGCG AAGGCGAATG GATCGAGATC TACGCTGACA CCGAGCAGGT GTGCACGCAG
GTCAGATTCG TGCCCGGATA TCCCAAATCC GAGTTGGTCT ACAACAACAA CTGCCGCCCG
AAAAACGTCA CCGTCAGTTT CAGCGACGGC ACAAGCATCG ATGTGGAGAT TGAAGACATC
ATGGGTCAGG AAATCACACT TGACCTGGAC AAGCCCGTGA AAACGACGTT CGTGCGCTTA
ACGATCAACG AGGTGTTTCC GGGAGACCAG TGGACCGACT GCACCGTCGC TGAATTTCAC
GCGAGCTAG
 
Protein sequence
MSQQFCTSCG APVQEGRNFC TSCGAPVASA NTQTEVRKPS TQQRICPNCH AAVADGMPFC 
TSCGHYLDAP VAAPPTQPTA KGPNKTLVAA VAAAVIIVAA VAATLAIIQP WAHDEPDAKS
EPAVAHKADK DDAETEDASD ATADSDGAAD ATADSEEEPQ ADPANTDAAK EEALDASVPA
VFDHVRASSE LPPDEYNSYY GVNNAVDNDM ATAWNEGNES NNGEGEWIEI YADTEQVCTQ
VRFVPGYPKS ELVYNNNCRP KNVTVSFSDG TSIDVEIEDI MGQEITLDLD KPVKTTFVRL
TINEVFPGDQ WTDCTVAEFH AS