Gene Shel_16400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16400 
Symbol 
ID8395530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1842222 
End bp1842833 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID644986394 
Producthypothetical protein 
Protein accessionYP_003144008 
Protein GI257064336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.346873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGA CGCCACGCAT CATCACCGTC GTGCTGACGG GCGGTCCCTG CGGCGGTAAG 
TCGACGGCCG AGCGCCTCCT GCACGCACAT GCGTGGCCCG CAGGCTGGCA GGTCGTTTTC
GTCGAAGAGT CCGCCACGGC GCTCATCAAA GCGGGTGTGA CCAGGGAGTC CTGCGGCGAG
CAGTACGCGT TCCAGTGCCG CGTGATCGAG CGGCAGCTCG TGCGCGAGCA GGACGCTCTT
GAGCTTGCGA GACAATCGGA CTCCGACACG GTCGTCGTAT TCGACCGAGG AGTCCCCGAC
AGCGATGCGT ATCTTGCCCC GGCCGAATAC CGGCAGGCCT TGGCCACGTA CGGGATGACG
CCCGAAAGCG CCCTGCTGCG CTACGATGTT GTGTTTCACC TGGTAACATG CGCAATCGGA
GCAGAAGATC ACTACGAGAC CACAGGCAAT GCCGCCCGCC GCGAAACCCT GGCCCAGGCT
GCCGCCGTCG ACGCCCGGCA TGCCGCCAGC TGGTCGGCGC ACCCCAGGCT TGTCACCTTG
CGCAACGGCC AGGGCTTCGA CGCCAAGATG GACGCGCTAA TCGAGTACAT CCAGGGCCTC
ATGCGCTCCT AA
 
Protein sequence
MKRTPRIITV VLTGGPCGGK STAERLLHAH AWPAGWQVVF VEESATALIK AGVTRESCGE 
QYAFQCRVIE RQLVREQDAL ELARQSDSDT VVVFDRGVPD SDAYLAPAEY RQALATYGMT
PESALLRYDV VFHLVTCAIG AEDHYETTGN AARRETLAQA AAVDARHAAS WSAHPRLVTL
RNGQGFDAKM DALIEYIQGL MRS