Gene Shel_16310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16310 
Symbol 
ID8395521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1831243 
End bp1832178 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content63% 
IMG OID644986385 
Productinorganic pyrophosphatase/exopolyphosphatase 
Protein accessionYP_003143999 
Protein GI257064327 
COG category[C] Energy production and conversion 
COG ID[COG1227] Inorganic pyrophosphatase/exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0050927 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00150657 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGAAA CCATTTACGT CGTCGGTCAC AAGAACCCTG ACAACGATGC TATTTCCGCC 
GCCATCGGCT TTGCTGCTTT CAAGAACGCC ATCTGCGCCC GCGACGGCAT CGATGCTGTC
TATAAGCCCG TCCGCCTGGG CCCGCTGCCC GTTGAAACGG CCTTCAACCT CGAACGCTAC
GGCGTGGAGG AGCCCGAGCT CATCGAGCGT GTTGGCGAAG GCGACAAGGT GGCCCTGGTC
GACCATAACG AGGTCCGCCA GTCCGTGGAC GGCATCGAGG ACGCCGAGAT CGTCGAAATC
GTCGACCACC ATCGCATCGG CGGCATGGTG ACCGCGGCTC CCATTCCGTT CACCAACCGT
CCCACCGGCT CCACCGCAGG CATTGTGACC AGTCTGTTCC GCGCCGAGGA CCTGCCCATC
CCGCAGCCCA TCGCCGCGTG CCTGCTGTCC GCCTGCCTGA CCGACACGGT CATCCTGAAG
TCGCCCACCA CCACGCCCTT CGACCACAAC CAGGTGGCCT ACCTGTCCAC GCTGCTGAGC
GTCGATCCTG TCGAATTCGG CATGGAGCTC TTCCGTAAGC GCGGCGGCGA GTCCGAAATG
GACATCGACA AGCTGGTCGG CGCCGACTCC AAGGAATTCG CGTACCGCGA CAAGGTCGTC
TACATCGCAC AGCGAGAGAC CGTCGACCTG AAGGCCGTGC TCGACCGCGA GGACGAAATC
CGCGAATACA TGAAGGGCCT GTGCGAGTCC AAGGGCTATG AGTTCGCAAT CCTCATGGCC
ACCGACATCC TGGCCGAAGG CACGCAGCTG CTGGTGGAAG GCAACACCGC CGCAGTTGAC
GCTATCTTCG ACATCACCTG CCAGCCCGGC GGCGTGTGGA TGCCCGGCGT GCTCTCCCGC
AAGAAGCAGA TCGCGGCAGC GGTCCTTGGC GCCTAA
 
Protein sequence
MTETIYVVGH KNPDNDAISA AIGFAAFKNA ICARDGIDAV YKPVRLGPLP VETAFNLERY 
GVEEPELIER VGEGDKVALV DHNEVRQSVD GIEDAEIVEI VDHHRIGGMV TAAPIPFTNR
PTGSTAGIVT SLFRAEDLPI PQPIAACLLS ACLTDTVILK SPTTTPFDHN QVAYLSTLLS
VDPVEFGMEL FRKRGGESEM DIDKLVGADS KEFAYRDKVV YIAQRETVDL KAVLDREDEI
REYMKGLCES KGYEFAILMA TDILAEGTQL LVEGNTAAVD AIFDITCQPG GVWMPGVLSR
KKQIAAAVLG A