Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_16210 |
Symbol | |
ID | 8395511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1823311 |
End bp | 1824189 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644986375 |
Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily |
Protein accession | YP_003143989 |
Protein GI | 257064317 |
COG category | [C] Energy production and conversion |
COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000147794 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATACGT TTAACTTGCT TACCAAAGAG ATGATTGCGC AGGCCGTTTA CGAGGCGATA CCGCAGACCG CCTGCGTGCT GCCCGCCGAT GTGCGGGATG CTCTCGTGCG CGCCCGCGGC CTTGAGGGCC CATCGCGCGG CGCCATCGTT TTAGACCAAC TGCTGGAAAA CGCCGATATC GCTGAAGCCG ACCGCGTGCC CATCTGTCAG GATACGGGCA CTACGTGGGT ATGTCTAGAG ATCGGGCCGG ACGTGTTGCT GCCGGGAGAC GCGTTCTCCC TGGTGAACGA TGCTGTGGCT CGGGCTTATA CGGAGGCCAA CCTGCGCAAG AGCGTCGTCA AGGACGCCCT TGTGGACCGC AGCAACACCG GCGACAACAC GCCGGCCTTC GTGGACGTGG AGTTCGTGGA CGCCCCCGGC GCCCGCGTGC ACGTGCTGTT GAAGGGCGGC GGATCCGACA ACGCATCCCG CGTGGTCATG CTCACCCCTG GCGCCGGCCG TGAAGGCATT GTGCGCGAGG TCATGGACTG CGTCCGCCAC AAGGCGGCAA ACGCTTGCCC GCCGCTGGTC ATCGGCATCG GCGTGGGCGG CACCTTCGAC AAGGTGGCCC ACCTGGCGAA AACGGCGCTT CTGCGTCCTG TGGGTTGTGC GAGCGAAAAC CCCGAGGTGG CAGCATTCGA GCGGGAGCTT CTGGACATGG TCAACGCCAC TGGCATGGGT CCCGGCGCCT TGGGCGGAAA GACTTTGGCC TTGGACGTCC ACGTGAACAC GGCACCGTGC CACATCGCGG CCCTGCCGCT TGCCATCAAC ATGGGATGCT CGGCCATGCG CCGCATGACC ATTGAGCTAG AAACCACGCC GGTGGGAGGG GTCCGATGA
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Protein sequence | MNTFNLLTKE MIAQAVYEAI PQTACVLPAD VRDALVRARG LEGPSRGAIV LDQLLENADI AEADRVPICQ DTGTTWVCLE IGPDVLLPGD AFSLVNDAVA RAYTEANLRK SVVKDALVDR SNTGDNTPAF VDVEFVDAPG ARVHVLLKGG GSDNASRVVM LTPGAGREGI VREVMDCVRH KAANACPPLV IGIGVGGTFD KVAHLAKTAL LRPVGCASEN PEVAAFEREL LDMVNATGMG PGALGGKTLA LDVHVNTAPC HIAALPLAIN MGCSAMRRMT IELETTPVGG VR
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