Gene Shel_16130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16130 
Symbol 
ID8395503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1815062 
End bp1815943 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID644986367 
Productpyruvate formate lyase activating protein-like uncharacterized Fe-S protein 
Protein accessionYP_003143981 
Protein GI257064309 
COG category[R] General function prediction only 
COG ID[COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000206983 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGAGGAG CCGCAGCTAC GCGGCTCCTT GCTTCGTGCG AGCTGTGCCC GCGCATGTGC 
GGGGCGGACC GCCTAGCGGG AAAACGCGGC GTATGCGGCG CTGCCGACGA GCTGCGTGTG
GCCCGCTCGG CTCTGCATTT CTGGGAGGAG CCTCCTATTT CCGGGGAGGC GGGAAGCGGC
ACGGTGTTTT TCAGCCACTG TCCGTTGCAC TGCATCTATT GCCAGAATGC CGGAATTGCA
AATGGCCAGG TAGGTCGCGA TATTACGGTC GAACGGCTTG CCGAATGCTA CCTTGAGCTG
CAATCCCAGG GGGCGCTCAA CATCAATCTG GTCACAGCTA CGCACTACGC CGTGCAGGCC
GTGGCCGCCC TTGACCGGGC CCGAGCATGC GGCCTTTCCA TTCCTGTGGT CTGGAACACG
TCGGGCTACG AGCGGGCGGA ACTGGTGCGC GCCCTGAACG GCACGGTGGA CGTGTGGCTT
ACGGACCTTC GCTACGCCCG TCCCGAAACC GCCAAGGCAT TTTCCGCCGC GCCGGATTAC
CCCGAGGTGG CACGGTCGGC CATCGCCGCC ATGGCGCAGT CGGATGCTCA GGTCATCGTG
CGGATCCTGG CGCTTCCCGG GCACGTCGAG GAAGCCTTCG AGAACGTGGC CTGGCTGGTG
AATACGTTCG GCGAACGCGT CACGCTGAGC ATGATGAGCC AGTACACGCC CATGGGGGCG
TTCCCGCAGC ATCCCGAACT CGAGCAGAGG GTCGATCCCG ACGAGTTCGA TGCGTTGCTC
GACTTCGTGG ATTCCTTGGG TGTGGAGGAG TACTTCTGGC AGGAGGGCGA AGCAGCCCTG
GAAAGCTTCA TCCCCGATTT CGAGGCGTGC GAAGGGGTGT AG
 
Protein sequence
MRGAAATRLL ASCELCPRMC GADRLAGKRG VCGAADELRV ARSALHFWEE PPISGEAGSG 
TVFFSHCPLH CIYCQNAGIA NGQVGRDITV ERLAECYLEL QSQGALNINL VTATHYAVQA
VAALDRARAC GLSIPVVWNT SGYERAELVR ALNGTVDVWL TDLRYARPET AKAFSAAPDY
PEVARSAIAA MAQSDAQVIV RILALPGHVE EAFENVAWLV NTFGERVTLS MMSQYTPMGA
FPQHPELEQR VDPDEFDALL DFVDSLGVEE YFWQEGEAAL ESFIPDFEAC EGV