Gene Shel_16110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16110 
Symbol 
ID8395501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1811125 
End bp1812267 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content63% 
IMG OID644986365 
Producthypothetical protein 
Protein accessionYP_003143979 
Protein GI257064307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000023311 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGACCTGA GCATGTTCGA ACTGATGGAC AAGGACAAGG TACTGGCCGC TGCAGGGCGC 
ACGCGCTCGG ACGGGACCTG CACGTTTACC GCCGACGGTT CGATATTGCT GTGCTGCGAC
AAGGACGTTG AGACCTACCG GGTGCCCGCC GGAACCCGCG CCATCGGGCC TCACGCCTTC
GAATATCGCA GGCGACTGAC CCGAATCGAG TTGCCGGAAG GGTTGGAAGA CATCGGCGAA
GCGGCCTTTT TGGCGTGCAA CGCGCTGGTC AAGGCCGATT TCCCCACGAC GCTCAAACAT
ATCGGCGACA TCGCCTTTTT CGCAACCAAG CTCAAGAGCA TACGCATTCC TGCCGGTTTC
GAATTCATGG GCGATGCTCC GTTTCTGTAC ATGCCCCGGC CCGCCGGCCG CAGCGGCTCT
ATGCTTGCGC CTGAATGCGC GGTCGAGGTG GAGCCCGGCA ACCTGCGGTA CAGCACTTCC
GACGGCTTTC TTCTGGAACG CATGGACGAC GGTCGGCTGC AGGCGGTGTA CTACTTCGGC
CCTGGCGGCG CCGTGACGAT TCCCGACGGC GTGTCGCGTG CGGGTGCTTA TGCGTTGACC
TGCTCTGTCA CCGTCGATGA GCTGAATATT CCCGCCTCGC TTCGCGAGGT AGGCACAAAC
GGGCTGTCCA TGCACAACCA CCCCGACGCG ATCCGTCTTG CCGTCGGACA GGGCGAGGTG
CTGGAGATTC TTCCGTCGAA GGAATCGCTC AAGACACGTC AATATGTGCG CATGTTCTCC
GACGGCGTGA TTGACGCTGC CCAGCTGGCG AAGGAGTATG ACGCCGGACT GCGTGCCATG
AAGCCGACGG AGGAGCGGAC CCGCCGTATC GTGCGCCGCC TGCAGAACGG GGTTCTTCTG
GACGGAAAGG ACCGATCGGC GTTTCTGAAC CTGCTTGCCA GGGACCTGGA CCGCATCGTC
GAGCGGTGCG CCCGAAGCGA CGATGTCCAA ACGGCGGGAG CCCTGTGCGA TTTGGGGGTC
ATTTGCCGGA GCAACATGTC CCACGCGATC GACGTGGCCA ACGCTGTGGG CGGCGTGGCG
GTGTGCGGTC GGCTGATACA GGCCAGCCGC AACATGGCCA GCCGACTGTC TTTGGACCTA
TAA
 
Protein sequence
MDLSMFELMD KDKVLAAAGR TRSDGTCTFT ADGSILLCCD KDVETYRVPA GTRAIGPHAF 
EYRRRLTRIE LPEGLEDIGE AAFLACNALV KADFPTTLKH IGDIAFFATK LKSIRIPAGF
EFMGDAPFLY MPRPAGRSGS MLAPECAVEV EPGNLRYSTS DGFLLERMDD GRLQAVYYFG
PGGAVTIPDG VSRAGAYALT CSVTVDELNI PASLREVGTN GLSMHNHPDA IRLAVGQGEV
LEILPSKESL KTRQYVRMFS DGVIDAAQLA KEYDAGLRAM KPTEERTRRI VRRLQNGVLL
DGKDRSAFLN LLARDLDRIV ERCARSDDVQ TAGALCDLGV ICRSNMSHAI DVANAVGGVA
VCGRLIQASR NMASRLSLDL