Gene Shel_16090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16090 
Symbol 
ID8395499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1807936 
End bp1809405 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content62% 
IMG OID644986363 
ProductATPase family protein associated with various cellular activities (AAA) 
Protein accessionYP_003143977 
Protein GI257064305 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.454576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000267923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGGATA TCGCACAGGC GAAACAACAG GTCAAAGATG CGGTTACCGC CTACTTGGCT 
CTGGATGGGT TGGGGGCGCC GCGTCTGGCA GCCTCCGGAC AGCGTCCGCT GTTCCTGCTG
GGGGCGCCAG GCATCGGCAA GACCGCCATC ATGTCCCAGG TCGCCCATGA GCTGGGCATC
GGACTGGTGA GCTACTCCAT GACGCATCAC ACCCGCCAAA GCGCGCTGGG CCTGCCTTTC
ATCGTGCATA AGGAATACGG CTCAGGCGAA GCATTCGACG TGAGCGAATA CACCATGAGC
GAAATCATCG CGAGCATCTA CGACTACATG GAGGAAACCG GGCTTGACCG GGGAATACTC
TTCCTGGACG AGATCAACTG CGTGTCGGAG ACGCTCTATC CCAGCATGCT GCAGTTCCTG
CAGTTCAAGA CCTTCGGCCG TCACCGCGTG CCGAAGGGGT GGGTGGTGGT GTGCGCCGGC
AACCCACCCG AATACAACCG AAGCGTGCAT GAGTTTGACA TCGTTACGCT GGACCGCCTG
CGCAAGGTGG AGATAGAGCC CGGCCTTGCC GCTTGGCGCG ACTACATGCG AACCATCCGG
TCGCACCCAT CGGTCACAAC CTACCTGGAG CTGCGCCCCG ACGACTTCTA CGTGGTGGAA
AGCACACCCG GCGGCAAGAG CTTCGTGACG GCGCGCAGCT GGAGCGAGCT TTCCGACCTG
CTGGTGCTCT ATGAGGACCT GGGGCTGAAC GTGGACCGCA CCGTGATCGG ACAGTACCTG
CAGCATGAAG ACGTGGCGGC GCGGTTCTCG TCGTACTACG GGCTCTTCTC CAAGTACCGA
AGCGACTATC GGATTGAGGA CGTCCTTTCG GGCCATGTGC CTGCGGATAT CTCGCAACGT
GCCCGCGATG CGGCCTTCGA CGAGCGGCTG GCTCTGATGG CGCTCATGCT TGACGCGCTG
GAAAGCGAGG CCCGCGACGT CATGGAGCGC CACGATGCGC TGGCATCGGT GCGGGAGGTG
CTGAAACGTG CGGAAGGCTG CGAAGGCCTG GCCTTGACCG ACGTGTTGGA ATCGGCCGTT
CATAGGGAAG AGACAGCGGC GGCAGGCGAT GCGGACGCTC GGTCGAAACG CAGGGCCATG
CAGACGACCG TTCTGCTGAA GGAGCTTCAG CCTGCAGCCG ATTATGAGGA AGCTGCGCAG
CTGTACCGCG AGGCAGTAGC CCGTTTCGAA TCGTCCGCCG ATGGCATGCG GTCTAAAATG
GACTGCGCCT ACGACTTCGT CGACAATGTG TTCGGCATGG GGAGCGAAGC GCTTGTGTTC
ACCACGGAGC TTGCGGCGCG GCGCGACCTT GCCCAGTTCG TTGCGCTGTT CGGCTGCGAC
GGGTATTTCA GGCACAGCGC CAAGCTGGCG ACGGACGTCG AGAGGGATGC CATCTTCGAC
GAGATAGACG CTTTGAACGC CGAGGCGTAA
 
Protein sequence
MMDIAQAKQQ VKDAVTAYLA LDGLGAPRLA ASGQRPLFLL GAPGIGKTAI MSQVAHELGI 
GLVSYSMTHH TRQSALGLPF IVHKEYGSGE AFDVSEYTMS EIIASIYDYM EETGLDRGIL
FLDEINCVSE TLYPSMLQFL QFKTFGRHRV PKGWVVVCAG NPPEYNRSVH EFDIVTLDRL
RKVEIEPGLA AWRDYMRTIR SHPSVTTYLE LRPDDFYVVE STPGGKSFVT ARSWSELSDL
LVLYEDLGLN VDRTVIGQYL QHEDVAARFS SYYGLFSKYR SDYRIEDVLS GHVPADISQR
ARDAAFDERL ALMALMLDAL ESEARDVMER HDALASVREV LKRAEGCEGL ALTDVLESAV
HREETAAAGD ADARSKRRAM QTTVLLKELQ PAADYEEAAQ LYREAVARFE SSADGMRSKM
DCAYDFVDNV FGMGSEALVF TTELAARRDL AQFVALFGCD GYFRHSAKLA TDVERDAIFD
EIDALNAEA