| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_16040 |
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| Symbol | |
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| ID | 8395494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1801959 |
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| End bp | 1802753 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644986358 |
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| Product | HAD-superfamily hydrolase, subfamily IIB |
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| Protein accession | YP_003143972 |
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| Protein GI | 257064300 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00143564 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000262808 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTGGCCC ATCAGAACGA AACCATGACG AAGTATCTGT TTTTCGACAT AGACGGCACC
TTGGCTGCAG GACCCATCGG CAACCGCGTC GTTCCGGAAG GAACCCGCGA CGCTTTGCTG
CGCCTTCGCA AAAACGGCCA CTTTACAGCC ATCTGCACCG GCCGAAGCCA TGCCATGGCC
CGCAGCTATA TGGAAGAGCA GGGGTTCACC AACATGGTCG CCGACGGAGG CAACAGCACC
GTCATCGACG GAAATCTTCT GGGCATCGAG CCTCTGGACA GGAAGAGATG CATCCAGGTT
CTGGAAGAAT GCGACAGGCT GAAGATCCCC TGGGCCGTGT CGGCCGACGA CAGCAATACG
CGTCTTTCTA TCGACGGACG CTTCGCCGAC CTGGTTGAAA AGGGCTACAT GGTCACGAAG
ACCGTCCCCA ACCTCGACTA CCACGCCATC CCCCGTTTCT ACAAGCTCTA CATCGCGGTC
AACGCTGAAG ACGAGAAACG CATCACCACG CTTGATCTGG TTCCCCACGT GCATTTCAGC
GACACATGCC TGTTCGTGGA ACCCATCGAC AAAAGCCGGG GCATCATGCG CATCATGGAG
CATCTGGGCG CGCCGATCGA AGACGTGGTG GTGTTCGGCG ACGGCATGAA CGACCTGAGC
ATGTTCGACC CGCGCTGGCT GTCCATCGCC ATGGGCAACG CGGTGCAGCC CCTGAAGGAC
GCCGCCGACT ACATCACGGC GAACGCCGAC GACGACGGAA TCCGCAAAGC CTGCGAGCAT
TTCGGTTGGA TCTAG
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| Protein sequence | MLAHQNETMT KYLFFDIDGT LAAGPIGNRV VPEGTRDALL RLRKNGHFTA ICTGRSHAMA
RSYMEEQGFT NMVADGGNST VIDGNLLGIE PLDRKRCIQV LEECDRLKIP WAVSADDSNT
RLSIDGRFAD LVEKGYMVTK TVPNLDYHAI PRFYKLYIAV NAEDEKRITT LDLVPHVHFS
DTCLFVEPID KSRGIMRIME HLGAPIEDVV VFGDGMNDLS MFDPRWLSIA MGNAVQPLKD
AADYITANAD DDGIRKACEH FGWI
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