Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_16040 |
Symbol | |
ID | 8395494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1801959 |
End bp | 1802753 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644986358 |
Product | HAD-superfamily hydrolase, subfamily IIB |
Protein accession | YP_003143972 |
Protein GI | 257064300 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00143564 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000262808 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTTGGCCC ATCAGAACGA AACCATGACG AAGTATCTGT TTTTCGACAT AGACGGCACC TTGGCTGCAG GACCCATCGG CAACCGCGTC GTTCCGGAAG GAACCCGCGA CGCTTTGCTG CGCCTTCGCA AAAACGGCCA CTTTACAGCC ATCTGCACCG GCCGAAGCCA TGCCATGGCC CGCAGCTATA TGGAAGAGCA GGGGTTCACC AACATGGTCG CCGACGGAGG CAACAGCACC GTCATCGACG GAAATCTTCT GGGCATCGAG CCTCTGGACA GGAAGAGATG CATCCAGGTT CTGGAAGAAT GCGACAGGCT GAAGATCCCC TGGGCCGTGT CGGCCGACGA CAGCAATACG CGTCTTTCTA TCGACGGACG CTTCGCCGAC CTGGTTGAAA AGGGCTACAT GGTCACGAAG ACCGTCCCCA ACCTCGACTA CCACGCCATC CCCCGTTTCT ACAAGCTCTA CATCGCGGTC AACGCTGAAG ACGAGAAACG CATCACCACG CTTGATCTGG TTCCCCACGT GCATTTCAGC GACACATGCC TGTTCGTGGA ACCCATCGAC AAAAGCCGGG GCATCATGCG CATCATGGAG CATCTGGGCG CGCCGATCGA AGACGTGGTG GTGTTCGGCG ACGGCATGAA CGACCTGAGC ATGTTCGACC CGCGCTGGCT GTCCATCGCC ATGGGCAACG CGGTGCAGCC CCTGAAGGAC GCCGCCGACT ACATCACGGC GAACGCCGAC GACGACGGAA TCCGCAAAGC CTGCGAGCAT TTCGGTTGGA TCTAG
|
Protein sequence | MLAHQNETMT KYLFFDIDGT LAAGPIGNRV VPEGTRDALL RLRKNGHFTA ICTGRSHAMA RSYMEEQGFT NMVADGGNST VIDGNLLGIE PLDRKRCIQV LEECDRLKIP WAVSADDSNT RLSIDGRFAD LVEKGYMVTK TVPNLDYHAI PRFYKLYIAV NAEDEKRITT LDLVPHVHFS DTCLFVEPID KSRGIMRIME HLGAPIEDVV VFGDGMNDLS MFDPRWLSIA MGNAVQPLKD AADYITANAD DDGIRKACEH FGWI
|
| |