Gene Shel_16030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16030 
Symbol 
ID8395493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1800856 
End bp1801878 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content58% 
IMG OID644986357 
Productacetyltransferase, fucose-4-O-acetylase 
Protein accessionYP_003143971 
Protein GI257064299 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3594] Fucose 4-O-acetylase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.109512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000313895 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAGAGA CCAGCATGCC GATACCGGCA CCCAAGAAAC GCATCGATTT TTTCGACAAC 
CTGAAGGGCG TGCTCATCAT CCTGGTGGTC ATCGGGCATT TCCTGCTGCC GGTGCACAAC
GACAACGCCG TGATCACTCC GATCTACTAC CTCATCTACG TGTTCCACAT GCCGCTGTTC
GTGTTCGTCT CGGGATTCTT CGCGGCAAGC ATCTTCAAGA ACGGGCGCCT GCGCTCCAAC
AAGATCTTCT CGATGCTGCT TATGGCCGCA TTGTTCCAGC TCACCATCAT GGCACTCAAA
TGGGACTGGT CCTTCGACTC GTTCCTCAAC TTCAACTCTG CGCCATGGTA CCTGGTGTCG
TTGGCCTGCT GGAACCTTCT GGTACCGCTG TTCCTCACCC TCAAACCCAA GCCCGCCATC
ATCGGCGCCT TCGCGCTGGC TTTGCTAGCC GGCTGCTGCG ACGGCCTTAC CACCTATATG
TCGCTGGTGC GCACCGTCGG TTTCCTGCCC TTCTTCCTCA TGGGCATGTA CTGTACGAAA
GAGCAGCTCA GCGCAATAAA GGAATCCTCG TGGCTCAAAT GGGTCGCCCT TGCCGCCGTG
GCGTTCATGG TGTGGTATTG CATCTTCGGC ACCTGCACGG CCGAACTCTG GCAGACCGGC
TACTACAACT CGGGCTACAC CGGCAGCAAC CTGGTGGGCA TGGCCGCCCG CACGGTGATG
TTCGCCATCG CCGTCCTCAT GTCGCTGGCC CTGCTCTTCG TCATGCCGTC GAAACATACA
TTCCTGTGCT ACCTGGGCGA ACGCACCTTG CAGATCTACA TCCTGCACCG CATCATCCGC
CAGGTGTTCA GCATCTTCGG CTTCTTCAAG CTGCCAGTCC TGCTTGACCC CGTGTGGGGG
CCGGTCATCC TGATAGCGCT TTCGCTCGCC GTGGTTGCCG TGTGTTCCAT CGACGTCATC
CGCAAGCCCT TCGACGCCAT CATGGGCATC AAGTGGAACG CGATCATAAA GCCTGCCGCA
TAA
 
Protein sequence
MAETSMPIPA PKKRIDFFDN LKGVLIILVV IGHFLLPVHN DNAVITPIYY LIYVFHMPLF 
VFVSGFFAAS IFKNGRLRSN KIFSMLLMAA LFQLTIMALK WDWSFDSFLN FNSAPWYLVS
LACWNLLVPL FLTLKPKPAI IGAFALALLA GCCDGLTTYM SLVRTVGFLP FFLMGMYCTK
EQLSAIKESS WLKWVALAAV AFMVWYCIFG TCTAELWQTG YYNSGYTGSN LVGMAARTVM
FAIAVLMSLA LLFVMPSKHT FLCYLGERTL QIYILHRIIR QVFSIFGFFK LPVLLDPVWG
PVILIALSLA VVAVCSIDVI RKPFDAIMGI KWNAIIKPAA