| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_15950 |
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| Symbol | |
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| ID | 8395485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1792044 |
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| End bp | 1793165 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644986349 |
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| Product | site-specific recombinase XerD |
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| Protein accession | YP_003143963 |
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| Protein GI | 257064291 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.182079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000384619 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCAAAT CCACTTTCGG GCATATTGAA CGTCTTGGCA AGAACCTGTA CAGATGCTAT
TGGCATGAGG ACGGCAGGCG CCGCTCCCAC CGCGTGCACG GGTCGCTGGA CGACGCGAAG
GACTTCCTCG CCTCCCGCAG GATCGGCCTC GCGGGGTGCT CGGACCGCAC CACCTGGCGC
GAGTTCTGGG CGGCGGTGGT GGAGCCCTCC TTCGACGGGC TGGCGGCCAA GACCGTCCAC
AACTACAGGC GGATATGGGA GCGCCACCTG GCGCCGACGC TCGGGCGGAG GACCGTCGCG
TCGACAAACG CGCAGGCGGC CGACAGGGCC CTGGCGCGGA TAGCGAGCCC CGCGTCCCAG
AAGGCGGCGA AGGCCCTGGG GCGCAAGATC TGCAACATGG CCGTCCGCGA GGGCATACTG
GAGCGCAACC CGTTCGTCGG CGCGAAGACG GCCCGCGCGG GCAGGCGCCG CAAGGAGCCC
TACACCGCGA GGGAGGTCGA GGCCTGGCTG CGGGGCATGC GCGGCTCCAA ATACGAGGCC
GCGCTCATTT GCGAGCTCGG TGCGGGACTC CGGCACGAGG AGGCGTGCGC CCTCACTTGG
GAGGACGTGG CCGAATGGAA CGGCAAGGCC GTCCTGCGGG TGAACAAGGC GCTCACGACC
GTCAACGGCC GCAGGGAGCT CAAGGGCACG AAGACGGCCG ACAGCGAGCG CGTCTGCATC
ATGGGCGAGC CGTTCGCGTC CAGGGTCCTC GAGCTGAGGG GCAAGGGGCC GCTGGTCCCG
TCCGCGCCCG GCACGGACGT GCGCAGCCCG TGCGACATAT ACGCGAACCC CGCGACGATC
ACCCACAACT ACCGCGAATG GTGCAGGAAA CACGGCATCA GGTACGTGTG CCCGAGGGAC
CTGCGCTCGA CGTTCGCCAC GCTGCACGGC GAGGCCGGCT CGCAGGACTC CATGGTGGCC
CTCGCGATGG GCCACACGGA CGGCACGACC AAGGGCCGGC ACTACCAGCA GCGCACGATC
GCCGGGCTCG CGATGATCGC CGACAACCTG GCGGAGTACC TCTGCACGCC CGACCCGGAC
CTTCCGGACA TTCCTTCTCT GTTCCCGCTC GACACGGCGT AA
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| Protein sequence | MPKSTFGHIE RLGKNLYRCY WHEDGRRRSH RVHGSLDDAK DFLASRRIGL AGCSDRTTWR
EFWAAVVEPS FDGLAAKTVH NYRRIWERHL APTLGRRTVA STNAQAADRA LARIASPASQ
KAAKALGRKI CNMAVREGIL ERNPFVGAKT ARAGRRRKEP YTAREVEAWL RGMRGSKYEA
ALICELGAGL RHEEACALTW EDVAEWNGKA VLRVNKALTT VNGRRELKGT KTADSERVCI
MGEPFASRVL ELRGKGPLVP SAPGTDVRSP CDIYANPATI THNYREWCRK HGIRYVCPRD
LRSTFATLHG EAGSQDSMVA LAMGHTDGTT KGRHYQQRTI AGLAMIADNL AEYLCTPDPD
LPDIPSLFPL DTA
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