Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_15940 |
Symbol | |
ID | 8395484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1791580 |
End bp | 1791939 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644986348 |
Product | predicted transcriptional regulator |
Protein accession | YP_003143962 |
Protein GI | 257064290 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0473945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000239728 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAATAC AGCTGAACAG GCTTCGAAAT CTTAGGGGGC TGTCGCAAGA GGACATGGCA CAAAGATTAG GAATCAAGAA GAGCCGCTAC GGAACTTGGG AGCGTGGCGA GCGAATGATG AACCTCGCTC AGGCGTGCCA ATGCTGCGAC GTGCTCGGAT GCTCGCTTGA CGAGCTCGCG GGCAGGGAGG CCCCTCACCT CTACACGGAC AGGCGGCAGG AGACCCTCAA CGAGGACTTC GCCAGGCTAG ATAACGAGGG GAAGGACGCA GCAATGGCCG CAGTCCGCGG CATCGCCTCC ATGCAGGCGG AAAAAAGCGT TTCTCGCCCG AGGTCTGACG GTGCTGAAGG CGCCGCATAG
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Protein sequence | MEIQLNRLRN LRGLSQEDMA QRLGIKKSRY GTWERGERMM NLAQACQCCD VLGCSLDELA GREAPHLYTD RRQETLNEDF ARLDNEGKDA AMAAVRGIAS MQAEKSVSRP RSDGAEGAA
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