Gene Shel_15560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_15560 
Symbol 
ID8395446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1773347 
End bp1774231 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID644986310 
Producthypothetical protein 
Protein accessionYP_003143924 
Protein GI257064252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.708312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00550212 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCAT TCGACATCTC CCGCGAGACA GCCAACGTCA TCTTCGACAA GGAGGTCTCC 
GCCGAGATCA TCAGCAAGGC CGTCGAGGAG TCCGCGTTCA TGCAGCTGGC CCCGAAGATG
GAGATCGCCG GCAACGGCAA GAAGTACCAG ACCATCACCG GCGACCCGGT CCCCGAGTGG
GTCGGCGAGA CCGAGGCCAA GCCCGTGGGC AAGTTCGACT TCGGCATCAA GGAGGTCGAG
CCCTACAAGA TGGCCATCAT CGTGCCGTTC TCGACCGAGT TCCGCCGCGA CAAGGCCGCG
CTCTACAACG AGTGCGTCAA CCGCCTGCCG AAGCTGTTCG GCCGCCAGTT CGACGCGACC
GTCATGGGGA CCGCCGCCCC CGGCCAGAAC TTCGACGTGC TCGGCGGCGC GCAGGCCGTC
AGCCTGACCC CCGCCGAGGG CAAGACCCTC TACGACCAGT TCGTGGCGGC AGACCAGCTC
ATCGGCGCCA ACGACGGCAT CATGAGCGGA GTCGCGCTCT CCCCGCAGGG CCGCTCCGCC
GTCCTCGGCG CGACCGACTC CACCGGTCAC CCGCTGTTCA CCGCCGGCGT GCAGTCCGGC
ACCGTGGACC CCATCCTGGG GGCGAACGTG TCCGTGCGCA AGGGCGTGTA CGCGGCGGGC
TCGCCCGCCA CGCTCGGCAT CGCGGGCGAC TTCGACAACT GCGCGTGGGG GGCCGTGGAC
GCCATCCAGG GCGCCGTGTC CGACCAGGCG TCCATCGAGT ACACGGTGGG CGACGAGACC
AAGACGCTCC ACCTGTGGCA GCACAACATG TTCGCCGTCC GCTTCGAGAT CGAGCTGGCG
TTCATGGTCC GCGACGCGGG CACCTTCGTC CGCCTGACGG CCTAG
 
Protein sequence
MTAFDISRET ANVIFDKEVS AEIISKAVEE SAFMQLAPKM EIAGNGKKYQ TITGDPVPEW 
VGETEAKPVG KFDFGIKEVE PYKMAIIVPF STEFRRDKAA LYNECVNRLP KLFGRQFDAT
VMGTAAPGQN FDVLGGAQAV SLTPAEGKTL YDQFVAADQL IGANDGIMSG VALSPQGRSA
VLGATDSTGH PLFTAGVQSG TVDPILGANV SVRKGVYAAG SPATLGIAGD FDNCAWGAVD
AIQGAVSDQA SIEYTVGDET KTLHLWQHNM FAVRFEIELA FMVRDAGTFV RLTA