Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_15380 |
Symbol | |
ID | 8395428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1759123 |
End bp | 1759929 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644986292 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_003143906 |
Protein GI | 257064234 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5632] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00636935 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0253427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTACG AGATTAACAA GCACCACGGA AGCTACAACA TCCAGCCGCG CAGCGCGTCG GCGGTGAAAT ACATCGTCGT GCACTACACC GGCAGCGGCA CGAGCGCGGC GCCCGCCGCG CTGAACAACT GCCAGTATTT CAGCGGCGGC GACCGCCAGG CGAGCGCCCA CTACTTCATC GACGATGAAA CCATCTACGA GTACGCCGAT CCGTCGCGCC ACCTCACGTG GCACGTGGGG GACGGCCGCG GCAAGTACGG CATCACCAAC ACCAACAGCA TCGGAATCGA GGTGTGCCAG GACGGCGACC GCCCGTTCAC CGAGGCCGAG ACCAAGCGGC TGCAGTGGCT CGTGCGCAGG CTCATGGACG AATACGGCGT GCCCGCCGAC CGCGTGGTGC GCCACTACGA CGCGAGCCGC AAGCTGTGCC CCTACTACTA CACGCCGGGC GGAAGCGGCG GCGACGCGGC CTGGAAGGCG CTGCACCGCC GCATCACGGC GGACGGCGCC TCGAAGGCCG GGTGGGTCAA GTCGGCCAAG GGCTGGTGGT ACCGCCGGGC CGACGGCACC TGGCCCGCGT CGAAGTGGGA GCGCATCGGC GGGGACTGGT ACTGCTTCGA CAAGGACGGC TACGCGATGG CGGATTGCTG GAAGAAGTCC GGGGGTAAGT GGTACTGGCT GCGCGGCGAC TGCCGCATGG CGAAGTCCAC GGTCCTGCAC AAGGACGGCA GGTGGTACGC CCTCGGGGCC GACGGCGCGA TGCTGCGGTC CGTCGCCACG GACAAGTCGG GCGCTCTGAG GCTTTAG
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Protein sequence | MSYEINKHHG SYNIQPRSAS AVKYIVVHYT GSGTSAAPAA LNNCQYFSGG DRQASAHYFI DDETIYEYAD PSRHLTWHVG DGRGKYGITN TNSIGIEVCQ DGDRPFTEAE TKRLQWLVRR LMDEYGVPAD RVVRHYDASR KLCPYYYTPG GSGGDAAWKA LHRRITADGA SKAGWVKSAK GWWYRRADGT WPASKWERIG GDWYCFDKDG YAMADCWKKS GGKWYWLRGD CRMAKSTVLH KDGRWYALGA DGAMLRSVAT DKSGALRL
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