| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_15050 |
|---|
| Symbol | |
|---|
| ID | 8395395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1731159 |
|---|
| End bp | 1732016 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644986259 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_003143874 |
|---|
| Protein GI | 257064202 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.316809 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.91579 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCAGGG AGCTTTCAGG GCAAGGGCAT GCGCTCAAGG ACCTCCTGGC CGCGTCGGGC
GTCCCGGCGT CGACCTACCA CTACAACAAG CTGAGGCCTG CGAAGCCGCC CACGAGGCCG
GAGCTCTGGG GCAAGGCCGT CGAGATCTTC TCCCGCTCGC CCAACGGCTG CGGCCACCGT
CAGATAGCGA TGTGCCTGCG CGCCGAGGAG GGGGCCGTCA TCGCCGACAA GACGGTGCTC
AAGATGATGC GCGAGATCGG CATCAGGTGC GGCATACGCC GCGAGACCGA CTACCATAAG
TACAACTCCT ACAGAGGCGT CGTGGGCAAG ACCTTCGAGA ACGTGCTGGG GCGCGACTTC
TCGGCGGACG GTCCGTGGCA GAAGCTGGGG ACGGACGTGA CCGAGTTCAA GCAAGGCTGG
GGGAAGGCGT ACTTCGCGCC CGTCTACGAC TTCGGGAGCA AGGAGATAGC CGCCTGGTCG
ATATCGCGGC ATCCGGACCT GGCGCAGCAG GAGGAGATGC TCGACATGCT TATCCCGAAG
ATGCCCGAGG GCGCGCATCC GATCATGCAA TCGGATATGG GATGGCAGTA CCAGCACGAC
GGTTATTGCA GCAGGCTCGA GGAGGCGGGC ATCGTGCAGA GCATGTCGAG GAAGGGCAAC
TGCATCGACA ACGGCGCGAC CGAGCAGGTG TTCGGACATA TCAAAGACGA ATTCTTCCGC
GGCAGGGAGT TCCCGGACTT CGACACGTTC AAGAAAGAGC TGGAGGAATA CATCGTATAC
TGGAACACGC AGAGGAGGCA GGTCAAACTG AAGGGACTGA CCCCGGAAGA GTTCCGGAAT
CAGTCCCTAG CGGCATAG
|
|---|
| Protein sequence | MIRELSGQGH ALKDLLAASG VPASTYHYNK LRPAKPPTRP ELWGKAVEIF SRSPNGCGHR
QIAMCLRAEE GAVIADKTVL KMMREIGIRC GIRRETDYHK YNSYRGVVGK TFENVLGRDF
SADGPWQKLG TDVTEFKQGW GKAYFAPVYD FGSKEIAAWS ISRHPDLAQQ EEMLDMLIPK
MPEGAHPIMQ SDMGWQYQHD GYCSRLEEAG IVQSMSRKGN CIDNGATEQV FGHIKDEFFR
GREFPDFDTF KKELEEYIVY WNTQRRQVKL KGLTPEEFRN QSLAA
|
|---|
| |