| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_15030 |
|---|
| Symbol | |
|---|
| ID | 8395393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1729247 |
|---|
| End bp | 1730524 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644986257 |
|---|
| Product | O-acetylhomoserine sulfhydrolase |
|---|
| Protein accession | YP_003143872 |
|---|
| Protein GI | 257064200 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
|---|
| TIGRFAM ID | [TIGR01326] OAH/OAS sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0823891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.931317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACA TCGATACCAT CTGCGTGCAG GGCGGTTACC ACCCGGGCGA CGCCGAACCA
AGGCAGATTC CCATCTACCA GTCCACCACC TGGAAGTATG AGACTTCCGA GCATATGGGC
CGCCTGTTCG ACCTGCAGGA ATCCGGTTAC TTCTACACAC GTCTGCAGAA CCCCACCAAC
GATGCCGTGG CTGCCAAGAT CGCAGAGCTT GAAGGTGGCA CCGCAGGCAT GCTGACCTCC
TCCGGCCAGG CCGCGAACTT CTTCGCCATC TTCAACATCG CCGGCTGCGG CGACCACATC
GTGTCCAGCA CCTCAATCTA CGGCGGCACC TTCAACCTGT TCGCCGTCAC CATGAAGCGC
ATGGGCATCG ATTTCACGTT CGTCGACCCG AATTGTACCG ACGAAGAGCT GGAGGCCGCG
TTCAAGCCGA ATACCAAGGC CGTGTTCGGC GAAACCATCG CCAACCCGGC GCTCACCGTG
CTTGACATCG AGCGCTTCGC CAAAGCCGCA CACGCCCACG GCGTGCCGCT GATAGTGGAC
AACACCTTCC CCACGCCCAT CAACTGCCGT CCCATCGAGT GGGGCGCCGA CATTGTGACC
CACTCCACCA CCAAGTACAT GGACGGTCAC GGTGCGGCGG TCGGCGGCGC CATCGTCGAC
TCCGGCAAGT TCGACTGGGA TGCCCACGCC GACAAGTTCC CCGGCCTCAC CACTCCTGAC
GACTCTTACC ATGGCGTAAC CTACACCAAG CAGTTCGGTC TGGAGGGCGC CTTCATCACC
AAGGCAACCG CCCAGCTCAT GCGCGACTTC GGCAGCATCC AGAGCCCGCA GAACGCGTTT
CTGCTGAACA TGGGTCTGGA GAGCCTGCAT GTGCGCATGG CCCAGCACGT GAAGAACGGC
CAGGCCATGG CCGAGTTCCT GCAGAACCAC CCGAAGGTCA CCTGGGTGCG CTATTCCGGA
CTTCCCACCG ACCCCTATTA CGAAGTCGCC AAGAAGTACC TGCCCAACGG AGGCTGCGGC
GTCGTGAGCT TCGGTGTCGA AGGCGGCCGT CCTGCAGCTG AGAAGTTCAT GGCCGGCCTG
AAGATGGCGC AGATCGCCAC CCATGTGGCC GACGCCCGCA CCTGCTGCCT GCATCCCGCC
AGCTCCACCC ATCGCCAGAT GACCGACGAG GAGCTTCTGG CCGCCGGCGT GTCCCCCGAC
CTGGTTCGCC TGTCCTGCGG CATCGAAGGC ACCGAGGACC TGATTGCCGA CGTTGCCCAG
GCGCTGGACG CCATCTAA
|
|---|
| Protein sequence | MANIDTICVQ GGYHPGDAEP RQIPIYQSTT WKYETSEHMG RLFDLQESGY FYTRLQNPTN
DAVAAKIAEL EGGTAGMLTS SGQAANFFAI FNIAGCGDHI VSSTSIYGGT FNLFAVTMKR
MGIDFTFVDP NCTDEELEAA FKPNTKAVFG ETIANPALTV LDIERFAKAA HAHGVPLIVD
NTFPTPINCR PIEWGADIVT HSTTKYMDGH GAAVGGAIVD SGKFDWDAHA DKFPGLTTPD
DSYHGVTYTK QFGLEGAFIT KATAQLMRDF GSIQSPQNAF LLNMGLESLH VRMAQHVKNG
QAMAEFLQNH PKVTWVRYSG LPTDPYYEVA KKYLPNGGCG VVSFGVEGGR PAAEKFMAGL
KMAQIATHVA DARTCCLHPA SSTHRQMTDE ELLAAGVSPD LVRLSCGIEG TEDLIADVAQ
ALDAI
|
|---|
| |