Gene Shel_14840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14840 
Symbol 
ID8395374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1704493 
End bp1704969 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content60% 
IMG OID644986238 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_003143853 
Protein GI257064181 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.508112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.275464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAG TCATACAGCG CGTTACCCGC GCAAGCATAA CAATCGACGG CATGGCAGGC 
AAAGACATCG GGCGGGGCTA CGTCATCCTG CTGGGCATCG GCAACGACGA CACTCCCGAA
CTGGGCAACA AGCTTTGGGA GAAAATCCTC AAGTTGCGCA TCTTCGCCGA CGACGATGGG
AAAACGAACC TGTCGCTGAA GGACGTCAAC GGCGAGGTAA TGATTGTCAG CCAGTTCACC
CTGTACGCGA ACTGCCGCAA CGGCAACCGG CCCTCGTTCA CCGATGCCGC CGCACCTTTC
CAGGCAGACG AGCTGTACCA GCAATTCGTC GAGCGTGCCA AACAGGACAT CGAAACCATC
TCCACCGGAT CTTTCGGTGC CGACATGCAG GTGGAGCTCG TCAACGACGG CCCCTTCACC
ATCCTGCTTG ACACCGACGA CCTGCTGGCG CCGCGCCGCG GGCAGTCCCG CGACTAG
 
Protein sequence
MRAVIQRVTR ASITIDGMAG KDIGRGYVIL LGIGNDDTPE LGNKLWEKIL KLRIFADDDG 
KTNLSLKDVN GEVMIVSQFT LYANCRNGNR PSFTDAAAPF QADELYQQFV ERAKQDIETI
STGSFGADMQ VELVNDGPFT ILLDTDDLLA PRRGQSRD