| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14750 |
|---|
| Symbol | |
|---|
| ID | 8395365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1693238 |
|---|
| End bp | 1695469 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644986229 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_003143844 |
|---|
| Protein GI | 257064172 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00041718 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGC ACGGTGAACG CATAGCATTC TTTCTCTGCA AGCGCTTGAA CGTGAACATG
GGTGGTTTGA CCCACGCCAC CCTGAACAGG GCAAGGGTGT TCGCGAACCA TGGCATTCGT
GTCGTGGTTC TGACCATGGA TTTCAATCCG GAATACCCCA ACATCTACGA AGCCCTGAGG
GCTAGGCACG GTCTGCCCGA AAACGCGACG TTTCTGAATA TCCACGAGTT TCTTTCGGGG
GAGCACTACG GGGTCGAAGG TGTCGAAACG ACCGAAATGA TCGCCGGTAT GGAAGTCACC
CAATTCAAGG CGGAATGCGG GCTCTCGAAG CGCATTGCGC GCAAGCCCGA CGAGGTGCCT
TTCGACGAGC GATACTATGA TTCGAACGGT CTGATGTACC TGGCCCGCAG GTATGACAAA
GACAAAAAGG ATTATTTCTG CATCGTCACG GCAAACGGTG AGCGCCGCGT GTATCCGTCC
CTTCTGTCCT TGCGTCAGCA TTTCATATCC GTCTTGCATG CGAAGTATCC CGACGCGTAT
TTCATCCTGG ACAGCCGTTT CCATGAAGGG GTTTTCTCCG ACAATCCCTT CGACATGTCG
ATCAAGAAGG CGGCCGTGTT CCATGCGAGC CATGTCCGTT CGCCAATGGA AATCGATTCG
CCGCTTGAGG ACCTTTCGCA CAGGATTGTG ACGCATCATG AGCAGTTCGA CGCGTTGGTG
TTTCTGACCG AGCGGCAGCG GTCGTATTTC CAAAACCGCT ACGGCCATCG TGACGGCACG
TTCATCATCA AACACCCTAT CGTGGAGCCT GAGCTGAAGC CCAAGGACTC AAACGGCAAG
CGTGCCGTGA TGGTGACCCG GCTGGTGGAT ACCAAGCAGG TCGATCAGGC CATCGAGGCA
GTGGCCCTGG CGGCGAAGTC CATCGAGGGC CTGACACTGG ACGTGTATGG CGAAGGTGCC
CAGATGGCGT ATCTGAAGGA CATGGCCATA CAGTGCGGCG TCGCCGACAT CGTCAACTTC
CGCGGATACG TGGAGCATGC CTCCGAGATC GTAGCGGACT ACGACGTGTC GCTGCTCACG
TCGAGCACCG AGGCGCTGTG CCTGGCCATT CCCGAAAGCC TTGTGGCCGG CACGCCTGTT
ATCGCGTACG ACTGCAAGTT CGGACCCGCC GAGCTCATTC AGGACGGCGT GAACGGACGG
TTGGTGCCGC TGAACAATGT GAACGCCTTG GCACGTGCCA TCGTGGAAGT GCTGGGCAAC
GACGAGCTTC TGGCTGAAAT GTCGCAGCAT GCCCTTGAGA CCCGCGGTCT GTTTACCGAC
GACGCGATCA TGGAACGTTG GGAAGAAGTC CTGGCCTGGA TGGATGCCCG CGAGGCGTCG
TATGCCGACA GGTTCTTAGA GCGCACGGCC TATGTGGAAT GGTGGGAAGC CTCTGCTTGC
GTGGCGCAGC TCAACGAGGC CGGCGATTTC AATATCCGCT TCGAGCTCGA CAGCAGGATT
GTGGCCGACT GCCTGGAGTC GGAGCCCGAG GTGTGCGTGT ACTCAAGGGA TTTCGCCATG
TACCCGCGGC TCGGCAACAC GCTCAAACTC AATCCTGTGA ACGGGACGAA CATATTCGAG
GTCGTGCTCA CGCCAGAGCA GCTGCAAGGG CTCATCGACC ATGATAAGCC CCTGGCGCTC
AGCGTCCACG TGGGCACGCA TGTGCACATG TTAGAGGCGA ACCATGCGGT CACACACCTC
ACGCGCCTTG CGTTCAGAAG TGTGATCAGC ACCACTGCGG CGAAGTCGGC GCTCAAGCGG
GTGTTGGCGA AAACCCGTTG GGCGAAATGC TTCGACGGGC AGAAGCCTTG GCCCGAAATG
ACCTTGGCCA CCGAGCCCGC ACCCGACGTG AATCTGCACG ACGTGGCGTC GGTCCTCGCC
AGCAAGAAGT TTACCGTGTG CGGCAAGGCC GTCTTCGAGC ACGGCACCTT CGAACATGCG
CGCATCGTAT TGGTTGCCGA AGGGGAGCAT GCCAGGCTCG AGCGGGAGGT TTGCCCCGAC
AGCACCGGTG ATTGGAAGAT CGAGGTGGAT GCAAACGATT TCTCGAAATC GACGGGGAAT
TGGAAGTTGA AGCTGCTGAC GTACTACGAC ACCGAACAGC GCGAGACAAC CAAGCTCAAG
GGGCTGTCCG TCAACAAGGT GGGCCCTGCG CACTTGCTGT CACACCAGGG AAAACGGCTT
GTCGTACGGT AA
|
|---|
| Protein sequence | MVEHGERIAF FLCKRLNVNM GGLTHATLNR ARVFANHGIR VVVLTMDFNP EYPNIYEALR
ARHGLPENAT FLNIHEFLSG EHYGVEGVET TEMIAGMEVT QFKAECGLSK RIARKPDEVP
FDERYYDSNG LMYLARRYDK DKKDYFCIVT ANGERRVYPS LLSLRQHFIS VLHAKYPDAY
FILDSRFHEG VFSDNPFDMS IKKAAVFHAS HVRSPMEIDS PLEDLSHRIV THHEQFDALV
FLTERQRSYF QNRYGHRDGT FIIKHPIVEP ELKPKDSNGK RAVMVTRLVD TKQVDQAIEA
VALAAKSIEG LTLDVYGEGA QMAYLKDMAI QCGVADIVNF RGYVEHASEI VADYDVSLLT
SSTEALCLAI PESLVAGTPV IAYDCKFGPA ELIQDGVNGR LVPLNNVNAL ARAIVEVLGN
DELLAEMSQH ALETRGLFTD DAIMERWEEV LAWMDAREAS YADRFLERTA YVEWWEASAC
VAQLNEAGDF NIRFELDSRI VADCLESEPE VCVYSRDFAM YPRLGNTLKL NPVNGTNIFE
VVLTPEQLQG LIDHDKPLAL SVHVGTHVHM LEANHAVTHL TRLAFRSVIS TTAAKSALKR
VLAKTRWAKC FDGQKPWPEM TLATEPAPDV NLHDVASVLA SKKFTVCGKA VFEHGTFEHA
RIVLVAEGEH ARLEREVCPD STGDWKIEVD ANDFSKSTGN WKLKLLTYYD TEQRETTKLK
GLSVNKVGPA HLLSHQGKRL VVR
|
|---|
| |