Gene Shel_14650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14650 
Symbol 
ID8395355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1682418 
End bp1683530 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content59% 
IMG OID644986219 
Productglycosyl/glycerophosphate transferase, teichoic acid biosynthesis 
Protein accessionYP_003143834 
Protein GI257064162 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0356089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000266035 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAGG TTCTGTATTG GATCGCCCGC TGGGGCATTC GGGCTGTATA CGCCATGTAC 
ACGGTGCTTC CGCTGAGGCA TCGTGTGGTC ATGATGTCGC GGCAGTCCAA CAGCAAGAAG
CTTGCGTTGG ACATGCGCCT TTTGAAGGAG GAGCTGCTCA GGAAGCGCCC TGATTTGGAC
ATCGTGGTGC TTTGCAAGCG CGACGACCAC TCGTTGCGGG CTTTTGTCGA GAACGGCTTC
TTCATGCTGA CCCAGCTGCG CTACGCCGCC ACATCCACGG TCATCGTGGT GGACGGCTAC
GTGCCGGCGG TGTGCATTCC CAACCTGCGC CAGGAGGTGT GGGTGCTGCA ACTGTGGCAT
GCGCTGGGCG GTTTCAAGAA GTTCTCTCTC ATGACGGTGG GGCAGCCGGG CGGCCATTCC
GAAGATCAGG CGCGCATCCT ATGCATGCAT CGCAACTACG ACGCCATCGT CTCATCGGGT
ACGAAGACGT CCGAAATCGT GGGTCCGGCT TTCGGATACC CGGCGTCCAG GTTCCTGCCG
CTGGGCCTTC CGCGTGCCGA CAGCGTGTTA GAGCCGCCGA AGTTCGACCC CGAAGACGAA
GAGGCTCTGG TCGACGACGG ATCGGTGACG CGCATTCTGT ATGCGCCCAC CCTGGAGAAC
AAGCAGGGTA CTGTCGAGGC CACGTTCAAG GAGATTCAGG AGGCCTTTGC CGACGACGAT
TCCATCGAGG TTATCTTCTC GGCGCACCCC GTCAGCAAGC TTCTGTCCGG TGGAACGAAG
GGGTCCACGC CGACGATCGA GCTCATGAAG CGGTCGGATT TTGTGGTGAC GGACTATTCG
TCCATTATTT TCGAGGCGGC GCTTCTGGGT AAGAAGGTGT TGTTCCTGAC GCCTGACATC
GAGGACTACA AGCAGCGGGT GGGTTTCATT CGGGACTTCC CCGAGGATCA TCCTGCCACC
ATGGCCATGA GCGTTTCCGA ATTGGCCGAC AAGGTTCACA ACCTGCCGCA AACGGCGTAC
GACGAGTTGC AGGACGACCT GATGTCCTAT CTCGACGGCT GCACCCCAGG CTCGTCTTCG
CGCATAGCCT CGGAAATCCT GAAACACGTA TAA
 
Protein sequence
MKKVLYWIAR WGIRAVYAMY TVLPLRHRVV MMSRQSNSKK LALDMRLLKE ELLRKRPDLD 
IVVLCKRDDH SLRAFVENGF FMLTQLRYAA TSTVIVVDGY VPAVCIPNLR QEVWVLQLWH
ALGGFKKFSL MTVGQPGGHS EDQARILCMH RNYDAIVSSG TKTSEIVGPA FGYPASRFLP
LGLPRADSVL EPPKFDPEDE EALVDDGSVT RILYAPTLEN KQGTVEATFK EIQEAFADDD
SIEVIFSAHP VSKLLSGGTK GSTPTIELMK RSDFVVTDYS SIIFEAALLG KKVLFLTPDI
EDYKQRVGFI RDFPEDHPAT MAMSVSELAD KVHNLPQTAY DELQDDLMSY LDGCTPGSSS
RIASEILKHV