Gene Shel_14600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14600 
Symbol 
ID8395350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1675574 
End bp1676830 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content54% 
IMG OID644986214 
Producthypothetical protein 
Protein accessionYP_003143829 
Protein GI257064157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000705391 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGAAGG TGCGTTCGAT AGCATTCATC GTGTCGGTTT TGGCGGTCAT GGGCAGTATG 
GTTCTGTATC AGGCTGCGGG TTTTCTTTTG CCTGGGTTCG AAACCAAGAC GACGTCGAGT
ATCGAGGGGC GAGCTTTTCT GACCCTGCAT GATTTGGCTG AAGATTCCTT TGATGACGGT
TCATTCCAGT CGGATTTCGA GCAATACGCC GCCGACGCCT TTCCTTTCAA GGATGAGTTC
TCGCTATGCA ATGCGGGCAT TCAGAGGGCC GAGATCAAAC TTGCCGCTGT TCCGTTCGGA
TACGATGCAT ATCCGACGTT CTTCGGCTCG GACGTATTCG CGCTTGAGTC CGAAGGTGTG
CTCAACTCAT ACCACCAGCC CATACAGCTT CCTGGTACCG CTTCATACGC TCACGTCGAG
GCATGGTGCG GCGCTTTGAA CGCTGCAGCG GAGTCGCATC CCGACGTGGC GTTTGACGTG
TGCGTGACGC TTCAGCTGCG GCAGAGCGAA CGTGACCCCA TGTACGGTTA TGTCCGCGGG
TATCCTCTTA TGGACAAGGA ATCGGTCGAG GATCTTTGGG GCGGGTTTTT GGGTGAAAGT
ATCGACCTGC ATGTGTTCGA TGCGCCATTG GAAATGTCTG TGGATGAGGC GTGGTATAGA
AACGACCATC ATTGGCAGGC GCCTTATGCT GTCGACTCGT ATGGGGTCTT GGCGGCGGAA
TCAGGTTGGG CGCCAGTGTC CTGGGACGAT GCCGACCACA TACAGGTTGT GCCTGCTTGG
TACGGATCGA ATGCTCGAAA CGGATTGGAT TTGGGGTTCC AAAGTGCATT CGTTGACCAC
GCCTATGACT TTTCCGATTA CAGGTATTAC AAGTTGACGG ACTCCGGAAA AGGCGAGATG
TTCGAACTCG GAAAACGCCA GGGTTATCTG GACGGTGCGG TTGGCGAAAA CGACATAGAC
ATGACGAACG TATACTCCGA ATATTACGGC AACGGTGCTG TTTGGATTGA GAACCCGAAT
GCTCAAAAGG GTACAACGTG CCTGGTCGTA GGCGATTCCA TGAGCTACTC TATCAGGCGC
TACATTGCCT TGAACTTTGA ATCCACCATC TGCATTGTGC CTGGCAATGT ATCGACGGAC
GGCAACGTCG ATTGGTATGC AGACCGATAC GATGTGGACC ATGTGGTCGT CCTCGGGCAC
GCCTATGCGC CGGATTTCAT CTACAGCATG TCGCCGGGGT TCCTTGGGAC GGACTAA
 
Protein sequence
MQKVRSIAFI VSVLAVMGSM VLYQAAGFLL PGFETKTTSS IEGRAFLTLH DLAEDSFDDG 
SFQSDFEQYA ADAFPFKDEF SLCNAGIQRA EIKLAAVPFG YDAYPTFFGS DVFALESEGV
LNSYHQPIQL PGTASYAHVE AWCGALNAAA ESHPDVAFDV CVTLQLRQSE RDPMYGYVRG
YPLMDKESVE DLWGGFLGES IDLHVFDAPL EMSVDEAWYR NDHHWQAPYA VDSYGVLAAE
SGWAPVSWDD ADHIQVVPAW YGSNARNGLD LGFQSAFVDH AYDFSDYRYY KLTDSGKGEM
FELGKRQGYL DGAVGENDID MTNVYSEYYG NGAVWIENPN AQKGTTCLVV GDSMSYSIRR
YIALNFESTI CIVPGNVSTD GNVDWYADRY DVDHVVVLGH AYAPDFIYSM SPGFLGTD