Gene Shel_14590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14590 
Symbol 
ID8395349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1674434 
End bp1675498 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content53% 
IMG OID644986213 
Producthypothetical protein 
Protein accessionYP_003143828 
Protein GI257064156 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00178082 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGAAT CGCGCTTTGA CTTGAACATC ATCAGCAAGT ACAGGGCACC GCTGTACGGA 
ATCAGCATTT TCTGGATTAT GCTTTTCCAC GGGTATGCCA AAGATTTGGT CGATTACTCC
TTCGGGCAAT CATGGCTGCA GTGGTTCTAC GAGTTCATCA AGGTTGGAAA CGTCGGTGTC
GACATCTTCC TGTTCCTATC GGGCGTATGC CTGTATTTTT CGTTCGTGAA AAACCACGAC
CACTATGCGT TCATCAAGAA ACGGCTGGCT CGGGTATACA TCCCCGTTAT CGCCGTTTTC
TTCATATGGT GGTTCTTCAA GAGCATCATC CAACATAGCG GAGGCTGGAC GTATCTGCTC
AGCAGACTCT CCCTTATGCA CTTCTGGCTA ACGTACGACG CCAGCGTGTG GTTCGTGTCT
CTGATCATCA TCCTGTACTT CGCTTATCCC TATATCCATG ACTTCTTGTT CGCCAAGGGC
GCAAACCCCG AAATCCGATG TGTCATCCTG GTGTTGGGCG CGCTGCTCAT GAACCACATC
CTCGGACGCA TCTGGCCGGG ATTCTTCGAC GGAACGGAAA TCGCCCTCAC ACGCATTCCC
GTGTTCATTA TCGGCTGCTG GTTCGGAAAA TACGTTTACG AGAAGAAGAC GCTCCCCTAT
AAGAACCTTT GGATCGCGCT GGCCGTCATC GCGGCCGTCG CATTCATCTA CATCTGCTTC
CTGGGTGTTC TGCACGGCGT CGTCCGACGC TATTTCTACA CGGTCGGCGG CATCGCTTGG
GCATACGTTT GGTCCTTGGC TTTTGCCGGA TTGGATCAGC TCCGAGGCGG AAAAGGCGCT
TCGTACCTCG GCAGATTCAT GGGCTGGCTG GGCGGCTTCT CCCTGGAGTT GTACGTGTCG
CACATCATGC TTAACCAGGT GTATCGCAGC TTCGGCTTCT ACAACGAAGG TTGGCTGCCG
GGTTATCTGG TGGTGGTGGC TTTGGCCATC CTGCTTGCAT TCGCGGCATA TAAGCTGACC
GATCCGTTCA TAAAGAGAAT AAGCGGTAAA CCTCGCGCGG CATAA
 
Protein sequence
MDESRFDLNI ISKYRAPLYG ISIFWIMLFH GYAKDLVDYS FGQSWLQWFY EFIKVGNVGV 
DIFLFLSGVC LYFSFVKNHD HYAFIKKRLA RVYIPVIAVF FIWWFFKSII QHSGGWTYLL
SRLSLMHFWL TYDASVWFVS LIIILYFAYP YIHDFLFAKG ANPEIRCVIL VLGALLMNHI
LGRIWPGFFD GTEIALTRIP VFIIGCWFGK YVYEKKTLPY KNLWIALAVI AAVAFIYICF
LGVLHGVVRR YFYTVGGIAW AYVWSLAFAG LDQLRGGKGA SYLGRFMGWL GGFSLELYVS
HIMLNQVYRS FGFYNEGWLP GYLVVVALAI LLAFAAYKLT DPFIKRISGK PRAA