Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_14520 |
Symbol | |
ID | 8395342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1664087 |
End bp | 1664938 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986206 |
Product | transposase |
Protein accession | YP_003143821 |
Protein GI | 257064149 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.216133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGC TTTCGGGGCG ATACCCCCTC GCCGACCTGC TGGAATGCGC CGATCTTGCC AGGTCGAGCT ACTACTACGC GCTGTCGCAC CCGAAGGCCC CGACCAGGCC GGAGCTCTGG GAGGCCGCCG CCGAGATATT CTCGCGCACC GCCAACGGCT GCGGCCACAG GCAGATCGCC ATGTGCCTGC GCGCCGAGCA GGGCGTGCGC ATAGCCGACA AGACCGTGCT CAAGATGATG CACGAGATGG GGATCAGCTG CGGGATCCGC CGCGAGACCG ACTACCACAG GTACAACTCG TACAGGGGCG CAGTCGGCAA GACCTTCGAG AACATCATCG GCCGCGACTT CGCAGCCGAC GGGCCGTGGG AGAAGATGGG CACCGACGTC ACCGAGTTCA AGCAGCCCTG GGGCAAGGCC TACTTCGCGC CGGTCTACGA CTTCGGCAGC AAGGAGATCG TCGCCTGGTC GACGTCGCTG CACCCCAACA TGGCCCAGCA GCACGAGCTG CTCGACCAGC TGCTTTCCAA GAAGCCGGAG GGTTGTGCCC CAATACTGCA TTCCAATATG GGCTGGCAAT ACCAGCAGGC CGGGTGGTGC AACAGGCTGA AGGAGGCCGG CATCGTGCAG AGCATGTCCA GGAAGGGCAA CTGCATCGAC AACGGCGCGA CGGAGCAGGT GTTCGGCCAT CTGAAAGACG AATTCTTCCG GAACCAGACA TGGCCAAGCT TCGAAGAGTT CAGGCGCGAC CTAGATGCAT ACATCGTCCA CTGGAACACG AGGAGGCGTC AGGTTAAACT GAAGGGACTG ACCCCGGAGG AATTCCGGAA TCAGTCCCTA CGTGCGGCGT AG
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Protein sequence | MSELSGRYPL ADLLECADLA RSSYYYALSH PKAPTRPELW EAAAEIFSRT ANGCGHRQIA MCLRAEQGVR IADKTVLKMM HEMGISCGIR RETDYHRYNS YRGAVGKTFE NIIGRDFAAD GPWEKMGTDV TEFKQPWGKA YFAPVYDFGS KEIVAWSTSL HPNMAQQHEL LDQLLSKKPE GCAPILHSNM GWQYQQAGWC NRLKEAGIVQ SMSRKGNCID NGATEQVFGH LKDEFFRNQT WPSFEEFRRD LDAYIVHWNT RRRQVKLKGL TPEEFRNQSL RAA
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