Gene Shel_14520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14520 
Symbol 
ID8395342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1664087 
End bp1664938 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content63% 
IMG OID644986206 
Producttransposase 
Protein accessionYP_003143821 
Protein GI257064149 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.216133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC TTTCGGGGCG ATACCCCCTC GCCGACCTGC TGGAATGCGC CGATCTTGCC 
AGGTCGAGCT ACTACTACGC GCTGTCGCAC CCGAAGGCCC CGACCAGGCC GGAGCTCTGG
GAGGCCGCCG CCGAGATATT CTCGCGCACC GCCAACGGCT GCGGCCACAG GCAGATCGCC
ATGTGCCTGC GCGCCGAGCA GGGCGTGCGC ATAGCCGACA AGACCGTGCT CAAGATGATG
CACGAGATGG GGATCAGCTG CGGGATCCGC CGCGAGACCG ACTACCACAG GTACAACTCG
TACAGGGGCG CAGTCGGCAA GACCTTCGAG AACATCATCG GCCGCGACTT CGCAGCCGAC
GGGCCGTGGG AGAAGATGGG CACCGACGTC ACCGAGTTCA AGCAGCCCTG GGGCAAGGCC
TACTTCGCGC CGGTCTACGA CTTCGGCAGC AAGGAGATCG TCGCCTGGTC GACGTCGCTG
CACCCCAACA TGGCCCAGCA GCACGAGCTG CTCGACCAGC TGCTTTCCAA GAAGCCGGAG
GGTTGTGCCC CAATACTGCA TTCCAATATG GGCTGGCAAT ACCAGCAGGC CGGGTGGTGC
AACAGGCTGA AGGAGGCCGG CATCGTGCAG AGCATGTCCA GGAAGGGCAA CTGCATCGAC
AACGGCGCGA CGGAGCAGGT GTTCGGCCAT CTGAAAGACG AATTCTTCCG GAACCAGACA
TGGCCAAGCT TCGAAGAGTT CAGGCGCGAC CTAGATGCAT ACATCGTCCA CTGGAACACG
AGGAGGCGTC AGGTTAAACT GAAGGGACTG ACCCCGGAGG AATTCCGGAA TCAGTCCCTA
CGTGCGGCGT AG
 
Protein sequence
MSELSGRYPL ADLLECADLA RSSYYYALSH PKAPTRPELW EAAAEIFSRT ANGCGHRQIA 
MCLRAEQGVR IADKTVLKMM HEMGISCGIR RETDYHRYNS YRGAVGKTFE NIIGRDFAAD
GPWEKMGTDV TEFKQPWGKA YFAPVYDFGS KEIVAWSTSL HPNMAQQHEL LDQLLSKKPE
GCAPILHSNM GWQYQQAGWC NRLKEAGIVQ SMSRKGNCID NGATEQVFGH LKDEFFRNQT
WPSFEEFRRD LDAYIVHWNT RRRQVKLKGL TPEEFRNQSL RAA