| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14500 |
|---|
| Symbol | |
|---|
| ID | 8395340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1662311 |
|---|
| End bp | 1663495 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644986204 |
|---|
| Product | glycosyl/glycerophosphate transferase, teichoic acid biosynthesis |
|---|
| Protein accession | YP_003143819 |
|---|
| Protein GI | 257064147 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.321442 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTCGC TCAAGTCGAC ATTGAAGTTC TTGGCCGCGG ATGCCGTGTA TGGGCACATG
CTTCCGAACG CTTATCGGAA GGCATGTGCC CAGTATCCCA TGGTCAAGGG TCGTGTCGTT
TTTGTCGAGA ACAACGGGTC CACCCTGTCC GAGAACTTCA GCCTCATCAG CCAGCGTTTG
GAAAAGCATC CCGAATACTC TCAGGAGGCC GTGTTTCTGC ATGAAACCAC AGCAGGCTTG
AAGGGCCGTC TGGACAACTC GAAGGCTTCC ATGAGGGTTT TGGCGGAAGC GGAATACATC
TTCCTCAACG ACGCCTCGCA GCTGGTAAGC TGCTTGCCGC TGCGTGACGG CACGCGCGCC
TTCCAGCTGT GGCATGCGTG CGGTGCATTC AAGAAATGGG GCTTGAGCTG CGTCGACCTG
AAATACGGTG CCGACGCCCG CATGTTCAAG AAACACCCGT ACTATGCCAA TCTTTCTCTG
GTCAGCGTGT CTTCCCCGGA TGTTTCCTGG GCATATCAGG AGGCCATGGG CATCGCCGAT
GCGTCCACCA TCAAGCCCTT AGGTGTAAGC CGCACCGATG TGTTCTTCAA TCAAGGCTTC
CTTGTCCGGT CGAAGGAGAA GCTCGCAAGG CTCTTCCCTG CCGCAGACGG GAAACAAGTC
ATTCTGTACG CGCCCACGTT CAGGGGCCGT CCCGCAACGG CAGCAACGCC CCATGATCTT
GACATCCAAT TGCTCAAGGA GCGTTTCGCA GACACCCATG TGCTCATCAT CAAGCAGCAT
CCTTTCGTGA AGGACCCTTA CGCCATTCCC GTAGAATGCG CATCGTTCGC ATACGAGGTT
TCGGGCGAGC TTTCGATTTC GGAGCTTCTG GCTTGCGCCG ACGTCTGCAT CACGGACTAT
TCTTCCATCG TATTCGAATA CAGCCTGCTC GACCGGCCGA TCTGCTTTTT CGCCACCGAC
CTGGAAGACT ACCGATCGTG GCGTGATTTC TATTACGACT TCGAAGAGAT GACGCCGGGC
CCCGTATTCA CGACCTCTGA AGACGTCGTG AACTGGGTCG ATGCAACCGC GCATCGGTTC
TCGAATGACC GCATCGCGGA GTTCCGCGAC AAGTTCATGC GCGCCTGCGA TGGCCACAGC
ACCGACCGCA TCTGCACCGA GGTATTCGGC TCTACGCTCG AGTAA
|
|---|
| Protein sequence | MGSLKSTLKF LAADAVYGHM LPNAYRKACA QYPMVKGRVV FVENNGSTLS ENFSLISQRL
EKHPEYSQEA VFLHETTAGL KGRLDNSKAS MRVLAEAEYI FLNDASQLVS CLPLRDGTRA
FQLWHACGAF KKWGLSCVDL KYGADARMFK KHPYYANLSL VSVSSPDVSW AYQEAMGIAD
ASTIKPLGVS RTDVFFNQGF LVRSKEKLAR LFPAADGKQV ILYAPTFRGR PATAATPHDL
DIQLLKERFA DTHVLIIKQH PFVKDPYAIP VECASFAYEV SGELSISELL ACADVCITDY
SSIVFEYSLL DRPICFFATD LEDYRSWRDF YYDFEEMTPG PVFTTSEDVV NWVDATAHRF
SNDRIAEFRD KFMRACDGHS TDRICTEVFG STLE
|
|---|
| |