Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_14450 |
Symbol | |
ID | 8395335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1653646 |
End bp | 1655244 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644986199 |
Product | glucan-binding domain-containing protein |
Protein accession | YP_003143814 |
Protein GI | 257064142 |
COG category | [R] General function prediction only |
COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.521361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGTGA AGCAACAGAA CGCCAACGTT GCGCTTCGTT TGGCTTTGGC TTCTCTTCTC GCGACTGTGG CGGTTGCGTT CGTCTGCGGC ATGACTTCTG TTCAGGCTTT TGCCGATGAA GTCGCTGCCG ACGGCCAAAC GGACCTTGCT GCCGAAGCCA CTCTCGACGA AGCTGCGGAG CCTGCTGAAG GGACGCTTGA GACCGAAGCC GGCATGGTTG GCGAAGATGC CGAAGGCGTT GTAGCCGACA TCGAAAACGC TGAAGATGCC GATGCCGTCC AGGAACCTGA GGTTGAGGCT CCTGCCGAAG CCGCTGTTGA GGAAGATGGG TCTGAAGATA CCGTACAAAC CCTCACAGAT CCCGAAGAGG AAGAGCTTAC CCCTGGTTGG CACGACACCG AAGACGGCAC CGGAAAGTTC TACGTGCTTG AGGACAAGAC GAAGGCCAAG GGCTGGCAGG ACATCGACGG CAAGCGCTAC TACTTCGACA CCGAGACCGC CATCATGAAG ACCGGCTGGC TGGACGATGC CGGCACGTGG TACTACCTCG ATACTAAGAC CGGCATCATG AAGACCGGTT GGGTGAAGAG CGGTTCCAAG TGGTACTTCA TGAGCGATCC CGATGGAGCC ATGAAGACCG GCTGGGTTAA GGACAAGGGT CTTTGGTACT ACATGGATTC CCCTTCCGGC GTTATGCAGA AGGGCCTTAT CTCCGTCAAT GGCAAAACGT ATTATATGAA CGGCAGCGGC GCCATGCAGA CCGGCTGGAA GAAGGTCGAC GGTTCGTGGT ACCACTTCGA TTCCAAGAGC GGCGCCGCAT CGACCGGTTG GGTACATGAC GGCTCCGACT ATTACTTCAT GAATGGCGAC GGCACCATGA AGACCGGCTG GATGAAAGAA GGAACCACCT GGTACTACTT CAAGGGGTCT GGCCGCATGG CTTACGACCA GTGGATTCAG GACGGCAGCG ATTGGTACCA TTTCGCTGCG AGCGGCGCCA TGCAGAAGGG CTGGAAGCAG ATCAAAGGCT CTTGGTACTA CTTCCGCGAC AGCGGCCGCA TGGTGAACAG CCAGTGGCTG AAGGTGAAGA ACGACTGGTA CTACTTCTAC TCCAGCGGTG CCATGGCATC CAACACCTAC GTGGGCAATT ACTATGTGAA TGCTAACGGA AAGTGGGTTA AGGACACGAA CCTTGCCAAG GCGAACTCCC TGTACAGCGC TACGAATTGG GTGGTCATTA TCGACACCCA TAAGAATTGG ATTTACATCT ACAAGGGTCC CAACGGCAAC CGTTACCTGT ATGATTACTG GCGCGTTTCC ACCGGAGCCG CCGCGACGCC TACCGTGAAG GGAGAATTCA CCGTAGGCAG CAAGGGTTAC TCCTTCGGCA ACCAGTACTA TCAGTGCTAC TACTACACGC AGTTCTTCAA CGACTACCTG ATGCACTCCA TCCTGTACTA CAGCAGGCCT TCCGCAGATG ACGTGAAGGA CGGACGCATG GGCATGAACA TCTCGCACGG TTGCGTTCGT ATGCCGATCG AGCGTGCTAA ATGGATTCAG AACAACATTC CATATGGCAC AAAGGTGTAC ATCTACTAA
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Protein sequence | MYVKQQNANV ALRLALASLL ATVAVAFVCG MTSVQAFADE VAADGQTDLA AEATLDEAAE PAEGTLETEA GMVGEDAEGV VADIENAEDA DAVQEPEVEA PAEAAVEEDG SEDTVQTLTD PEEEELTPGW HDTEDGTGKF YVLEDKTKAK GWQDIDGKRY YFDTETAIMK TGWLDDAGTW YYLDTKTGIM KTGWVKSGSK WYFMSDPDGA MKTGWVKDKG LWYYMDSPSG VMQKGLISVN GKTYYMNGSG AMQTGWKKVD GSWYHFDSKS GAASTGWVHD GSDYYFMNGD GTMKTGWMKE GTTWYYFKGS GRMAYDQWIQ DGSDWYHFAA SGAMQKGWKQ IKGSWYYFRD SGRMVNSQWL KVKNDWYYFY SSGAMASNTY VGNYYVNANG KWVKDTNLAK ANSLYSATNW VVIIDTHKNW IYIYKGPNGN RYLYDYWRVS TGAAATPTVK GEFTVGSKGY SFGNQYYQCY YYTQFFNDYL MHSILYYSRP SADDVKDGRM GMNISHGCVR MPIERAKWIQ NNIPYGTKVY IY
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