| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14340 |
|---|
| Symbol | |
|---|
| ID | 8395324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1636124 |
|---|
| End bp | 1637128 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644986188 |
|---|
| Product | glycosyl transferase |
|---|
| Protein accession | YP_003143803 |
|---|
| Protein GI | 257064131 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.049035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCCG AACAGAAACT GTCCGTCGTC ATACCATGTT ACCGATCCCA GGATATGATC
GAAGGCGTTA TCGAGCGACT GGTCGGAACG TTGACGCAAC GTTTGGATGA AGAGCACTTC
GAGATAATCC TTATCGACGA CTGCTCGCCT GACGATACGT ACAAAGTGCT TTCCGACATC
GCCGCGGCGC GCCCTTACGT CAAAGTGATT CACATGGCAC GGAACTTCGG CCAGCACTCG
GCCCTTATGG CGGGCTTTGC ATTCGTCACC GGCGACATTG TCGTGTGCAT GGACGACGAC
GGCCAAACGC CTCCGGAAGA AATCTTCAAG CTTGTCGATA AGATCGGCGA AGGGTACGAC
CTGGTGTATG CCAAGTATCA CTCGAAGAAA CATTCGCTGA TCCGCAACTG GGGTTCGCAG
CTCAACGAGC TGATGGCGCA GTCGCTCATC GGTAAGCCCA AAGAAATCAC CATGTCCAGC
TATTTCGCTG CGGAGCGGTT CCTTATCGAT GAGGCGCTCC GGTACCAGAA CCCCTATCCC
TATGTCGAAG GCCTTATGCT CCGCGCGACG AAGAACATCG CCAACGTGGA TGTGGAGCAT
TCCGAACGCC TGGCAGGGGA GTCGGGCTAT AGCTTCGTTA AGCTGGTCGG TCTGTGGCTC
AACGGATTCA CGGCGTTTTC CGTCAAACCG CTTCGTCTGG GTTCGGTAGT GGGCACCCTG
TTCGCGGCCA TCGGCTTCAT AAGCGCCATC GTCGTTGTCA TCCGACGCTT CATCAATCCG
GTGGTGGCCA TCGGCTGGGC TTCCACGTTT TCCGCTATGC TCATCATCGG AGGTATGATT
CTGGCAATGC TCGGCATGCT GGGAGAATAC ATCGGCCGCA TATACATCTC GCTGAACAAC
AGCCCGCAAT ACGTCATAAA GAGCACGTTG AACTGCGGCG ATGAGACGTA TTCGCAAGGT
CGGTTGAAGG CTTCGGAAAC GAATCGCCTG GGTGACGGCA AGTAG
|
|---|
| Protein sequence | MDSEQKLSVV IPCYRSQDMI EGVIERLVGT LTQRLDEEHF EIILIDDCSP DDTYKVLSDI
AAARPYVKVI HMARNFGQHS ALMAGFAFVT GDIVVCMDDD GQTPPEEIFK LVDKIGEGYD
LVYAKYHSKK HSLIRNWGSQ LNELMAQSLI GKPKEITMSS YFAAERFLID EALRYQNPYP
YVEGLMLRAT KNIANVDVEH SERLAGESGY SFVKLVGLWL NGFTAFSVKP LRLGSVVGTL
FAAIGFISAI VVVIRRFINP VVAIGWASTF SAMLIIGGMI LAMLGMLGEY IGRIYISLNN
SPQYVIKSTL NCGDETYSQG RLKASETNRL GDGK
|
|---|
| |