Gene Shel_14290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14290 
Symbol 
ID8395319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1631836 
End bp1632747 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content58% 
IMG OID644986183 
Productpredicted esterase of the alpha-beta hydrolase superfamily 
Protein accessionYP_003143798 
Protein GI257064126 
COG category[R] General function prediction only 
COG ID[COG4667] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCA TCGATACGGA TTCAGTGCAG CTCAACGAGA AGGCTGCCTA TGTAGGAAAA 
CCCACCGTCA ACGCAAACCT GGTTCTTGAA GGTGGCGCCA TGCGCTGCAT GTTCACGGCT
GGCGTTCTAG ATTATTTCAT GGACAACGAC CTGTGGTGCG AAACGGTCAT CGGCGTGAGC
GCAGGGGCCC TGAGCGGCTA CAACTACGTG GCCGGCGAAG TCGGGCGCAC CTGCTACCTG
AACATGAAAT ACTGCAACGA CCCCCAGTAC CTCTCCATGC GCAACTTCGC CCTGACGGGC
AACGCGATTC GCGAGGACTA CATGTTCGAC GAGATTCCCA ACAATCTGGA TCCGTTGAAC
TACAGCCACT TCGACGAATC CCCCATGAAA CTCATCACGG TCGCAAGCAA CATCGAGCTT
GGCGAAGCCG ACTACCATGT GATGGAAAAC GGCCGCGACA CCCGCTACCT GCTGGCAAGC
GCGAGCATTC CCCTGGTATC GCAGATCATC GAGCTTGACG GAAAGAAGCT GCTGGACGGA
GGCAGCTGCG ACAGCGTGCC GGTCACCTAT TCGCGCCTGC TAGGCAATAC GGACAAGCAC
ATCGTCGTTT TGACCCACCA TGCCGACTTC GTGAAGCGCC CCAACCGGGT GATGCCGTTG
GCAAACCGCG TGTACAGCGA CTACCCGTTG TTCGTGGAGC GGTTGGAGTA CCGCCATTAC
GAATACAACC GCCTGTACCG CATGATACGC CGCCTGCACG ACGAGGGTGT CATCTTCGCA
ATCTTCCCGC CCGAACCGGT GGAGGTGGCG AACATGGAGA AGGATCCGGC CAAACTTTTC
GCGTTGTATG AGCAAGGCTA TGCCCATGCC GCCGAGCAGT GGGACGCGCT TTCGGCCTAT
CTTGCACGCT AA
 
Protein sequence
MKLIDTDSVQ LNEKAAYVGK PTVNANLVLE GGAMRCMFTA GVLDYFMDND LWCETVIGVS 
AGALSGYNYV AGEVGRTCYL NMKYCNDPQY LSMRNFALTG NAIREDYMFD EIPNNLDPLN
YSHFDESPMK LITVASNIEL GEADYHVMEN GRDTRYLLAS ASIPLVSQII ELDGKKLLDG
GSCDSVPVTY SRLLGNTDKH IVVLTHHADF VKRPNRVMPL ANRVYSDYPL FVERLEYRHY
EYNRLYRMIR RLHDEGVIFA IFPPEPVEVA NMEKDPAKLF ALYEQGYAHA AEQWDALSAY
LAR