Gene Shel_14250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14250 
Symbol 
ID8395315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1627673 
End bp1628617 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content63% 
IMG OID644986179 
Productprotein-(glutamine-N5) methyltransferase, release factor-specific 
Protein accessionYP_003143794 
Protein GI257064122 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.537265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG TGTGGACAGT GAAGAATACG CTGGATTGGT GCCAGGAGTA TCTGCAGCGC 
CACGGCGACG AGAACCCGCG TCTGTCGGCG CAGTGGCTCA TGTCCCACGC AACGGGTCTT
TCCCGCGTCG AGATCTACAC CAATTACGAA CGGCCGCTTT CCACCGAGGA GCGCGACGTC
CTGCGCGACG CGCTGCGCCG CCGTGGATCC GGGGAGCCGC TGCAGTACAT CCAGGGCAGT
GCGCCTTTCC GGTTCATCGA GGTGAAGGTG CGCCCGGGCG TGCTTATACC CCGGCCTGAA
ACGGAAGTCC TGGTGGATGA GGCCATGCGT GAGCTGAAAA GCATCATGCC CGATGCGTTT
ACCCATCGCA CCGCCCGCGA CTCGATGTCC GTAGACGGGG AAGAACCCGT TCCTGCCGAG
GCGTTCAAGA TTCCGACCTT CAACGTGGTG GACGCCTGCA CGGGGTCTGG CTGCATCGCC
TGCGCAATCG CATCCGAGCA CGCCAACGCG CAAGTTGTAG CGACGGACGT TTCCGAAACC
GCAGTCGAGC TTGCCCGGGA GAACGCGGCC GATCTGGGCT TGGGGGACCG TATCGAGGTG
CGTCTGTGCG ATTTGCTTGC CGATGCGGAA GACTCCTGGG CCGACCTGAT CGTTTCGAAC
CCGCCCTACG TTCCTACCGC AGTGGTCGAT TCCGAGATTC CGGCCGAGGT TGCCGATTTC
GAGCCGCGGC TGGCGCTGGA CGGGGGAGAG GACGGACTGG ACATCTACCG ACGCCTGCTG
GCCGACGGCA AGCGCGTCCT GAAAGCTGAC GGAATACTTG CATGCGAGTT GCACGAGACC
TGCTTGGAGG AAGCAGCACG GCTTGCCGAA GAGGCACACT ACACCCAGGT GCGAATAGCG
AAAGACCTGG CCGGGCGTCC GCGCATCATC GTGGCTCACG CATAG
 
Protein sequence
MPEVWTVKNT LDWCQEYLQR HGDENPRLSA QWLMSHATGL SRVEIYTNYE RPLSTEERDV 
LRDALRRRGS GEPLQYIQGS APFRFIEVKV RPGVLIPRPE TEVLVDEAMR ELKSIMPDAF
THRTARDSMS VDGEEPVPAE AFKIPTFNVV DACTGSGCIA CAIASEHANA QVVATDVSET
AVELARENAA DLGLGDRIEV RLCDLLADAE DSWADLIVSN PPYVPTAVVD SEIPAEVADF
EPRLALDGGE DGLDIYRRLL ADGKRVLKAD GILACELHET CLEEAARLAE EAHYTQVRIA
KDLAGRPRII VAHA