Gene Shel_14200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14200 
Symbol 
ID8395310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1621384 
End bp1622601 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content58% 
IMG OID644986174 
Productcell division membrane protein 
Protein accessionYP_003143789 
Protein GI257064117 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATT TCAACCAGAT TTCATTCCTG CGCACGCCTG TGGACAGCCC GTCTGGTGCC 
CAGACGCAGA AGCACGCCAA TCCAAGCGGC TCCAAGAAGA CCGGTACGGT GCCAGTACCG
TTGCTTCTTA TTGTCACGGC GCTTGTGGGC TACGGCCTGG TGGTGGTCTA TGCGGCTGTG
GCCAGCAACT CGGACTACTC CTTCTCGCAT CAGCTGGTCG GCATCGCCAT GGGCATCGTG
GTCATGCTCA TCGTGCGCAT GTTCGACTAT CGGATGCTTG CGGGCTACAC CATCATGCTG
TTGATCGTGA ACGTGGTCCT TATCATGTCG CCCCACCTGC CTGTCATCGG CGTGACCAGC
CACGGCGCCA CCAGTTGGAT CAATGTGGGC ATGCAGCTGC AGCCAGGCGA GTTCGCCAAG
GTCACGGTCA TCCTGCTGGA TGCAAGCCTG ATGGCCCGCT ACGGTGCCAA CCTGGACGAC
CCCAGGGAAT ACATGAAGGT GTTGGGCATC ATGGCCATAC CGTTTTTGTG CATCATGACC
CAGCCCGACC TGGGCACGGG CCTGGTATAC CTGTTCATCG ACGCTGTGGC GCTGGTCATC
GGCGGAGCGA AAACGCGGTA CCTGCTCATC ACCTTGGCCG TTTGCGTTAT GCTGGTCGCC
GTGATGTTCG GCATCGACGA GCTCATCAAA AACTCCACCG GCGAATACAA GCTGCTCAAG
CAGTACCAAC GCAACCGCCT GCTGGTGTTC TTGGACCCCG AGGCCGACAC TTCGGGCAGC
GGTTACAACC TGCAGCAGGC CATGATCGCC ATCGGCTCCG GCGGTCTATT CGGCAAGGGC
TACATGAACG CGACGCAGTC GAGCCTGGGT TTCGTGCCTG AGTCGGCCAC CGACTTCATC
TTCTGCGTGC TGGCCGAGCA GTTCGGGTTC TTCGGTTCCC TGCTCCTTCT GGCGCTGTAT
CTGGCCCTTA TCTTCATATG TATAAGCATT GCACGCAATG CCGGCGATTT GCATGGTACT
ATCATCGTAA TGTGCGTTGT CGGCATGTGG CTGTTCCAGA TCCTTGAGAA CATCGGGATG
GACATCGGCC TTATGCCGAT TACAGGCATC CCGCTTCCGT TCATGAGCTA CGGCACATCG
TTCATGATGG TGAACTTCAT CTTGCTCGGC GTCGTATGGT CGGTCTACGC CCATAAGGGC
AGCAAGCAGG ACGTGTAA
 
Protein sequence
MADFNQISFL RTPVDSPSGA QTQKHANPSG SKKTGTVPVP LLLIVTALVG YGLVVVYAAV 
ASNSDYSFSH QLVGIAMGIV VMLIVRMFDY RMLAGYTIML LIVNVVLIMS PHLPVIGVTS
HGATSWINVG MQLQPGEFAK VTVILLDASL MARYGANLDD PREYMKVLGI MAIPFLCIMT
QPDLGTGLVY LFIDAVALVI GGAKTRYLLI TLAVCVMLVA VMFGIDELIK NSTGEYKLLK
QYQRNRLLVF LDPEADTSGS GYNLQQAMIA IGSGGLFGKG YMNATQSSLG FVPESATDFI
FCVLAEQFGF FGSLLLLALY LALIFICISI ARNAGDLHGT IIVMCVVGMW LFQILENIGM
DIGLMPITGI PLPFMSYGTS FMMVNFILLG VVWSVYAHKG SKQDV