Gene Shel_14170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14170 
Symbol 
ID8395307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1617594 
End bp1618256 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID644986171 
Productuncharacterized conserved protein (DUF2344) 
Protein accessionYP_003143786 
Protein GI257064114 
COG category[S] Function unknown 
COG ID[COG5011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAG GCGAATTCAA GATCCGCGTG ACATATGCCA TGCGGGGCCG TCTTGTCATG 
CTGTCGCATC TCGAGGTGGC GCGCGCGTTG GAACGAGCGG TTCGCCGTGC CGATCTGCCA
TTTGCCGTCA CGCAGGGCTT CTCGCCCCAT ATGAAGCTGG CTTTCGGAGC TGCGCTTCCT
GTTGGCGTGG GCGGCGACCA CGAGATCTTC GACGTCACCA TGACGGAATA CGTCGACCCA
GACGAGGCGC TCAGGCGCCT GCAGGACGCG AGCCCATACG ACCTGATGCC CGAATCGGTG
GAATACATCA CACGAGAGGT GAAGGCTGCA AGCGTCGCGT ATCCGTTCGG CACCTATCGG
GCCGTGTTCG ACGGTCCTGT GGATGGCCTG CAAGTGCCTG ATTCGATTAC GGTCATCCGC
AAGAAGAAGG AGAAACAGCT GCGTCCGGCG GACTTCTTGG TGGGCGCCCT CGAGAAGAAC
GGGAACGAGA TGCTATTCAC CCTGGAGGCC AAACCTTCTG GGTCGCTTCG ACCGGACGTG
CTGGTCAACG CCATGCTTGA CGGAGCCGAA GACGGTTTGG TGAACACCGA CCTCGGTGCC
GCAAGGTCCG ATACGCGCCT TCATGTGGTG TCGCTCATGC GCATCGCGCA GCGGGCCGAG
TAG
 
Protein sequence
MMEGEFKIRV TYAMRGRLVM LSHLEVARAL ERAVRRADLP FAVTQGFSPH MKLAFGAALP 
VGVGGDHEIF DVTMTEYVDP DEALRRLQDA SPYDLMPESV EYITREVKAA SVAYPFGTYR
AVFDGPVDGL QVPDSITVIR KKKEKQLRPA DFLVGALEKN GNEMLFTLEA KPSGSLRPDV
LVNAMLDGAE DGLVNTDLGA ARSDTRLHVV SLMRIAQRAE