| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14100 |
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| Symbol | |
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| ID | 8395300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1608043 |
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| End bp | 1613586 |
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| Gene Length | 5544 bp |
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| Protein Length | 1847 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644986164 |
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| Product | predicted helicase |
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| Protein accession | YP_003143780 |
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| Protein GI | 257064108 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4889] Predicted helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.605074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCG TAACGCATAT CACGAGCAGG GCGCATCAGC CGCGTGGCGG TTACATCAAC
CTCGAGAGAT TCGACGAGCA CGCCTTCGAG GACGGGCTTC CCTTCCACGG GGAGTACAGC
ATCGTTCCGG GCACGCTGGG TACGACCGTG GATTACCTTT CGCGTGCGCT TCTCGGCTTC
TCCGTGAAGA AGGCTTTCGA GATTGCCATC ATGGGCGCTC ACATCATTGG AGCCAAGGAG
ACCGGCTACG CCAACGACCT TGCGAACCAG CTTCAGGACG CCATCGACTC CGGAGAGCTT
ACCGATAACG ACATCCGGAA CGCCGTGAGG CTCGCACGAT ACGACGCAGC CTATCGGGCA
GGTGCCAAGT CGCACAACCC GAACGAGGGC GCAGAGGTCG ACGAGAAGAC GGTTTCGGAC
ATCCGCACGC TCGTGAGGCG TACCGTTTCC TTCTTCGAGG AGAACGGCCC TGTCGTCGAT
GCCGGGATTA CGTTCGAGGG CGGCTACGGC GACGTGCTCG ACTCCGGGGA CGCCGACCTG
CTGACGGAGG ACACTCTCTG GGACCTGAAG ACTTCCAAGG ACAAGCCGAG CCCGGCTGAC
ACGCTTCAGC TCGCCGTGTA CTACCTGCTC TCGCTTCGCA GCTCGAAGGA AGAGTTCAAG
CCGATTCGAA AGCTCGGCTT CTACAACCCG CGCTTGAACA AGTCGTGGAC GATAGACGTG
CTGGACCTCG ATGAGGATGT TCTCGACCAG ATCCAGACCG ACATCCTCGG TTTCGAAAAG
CACAAGGCTC AGCGCGTTAA CTGGAGCAAG GAGCCGAGCC AGACGATCTA CTACGTCATC
GACTGGATTC GCGACACGGC GGAATCGGAA TCGGACAAGG GAACGAAGTT CGAACGCGCG
AGCCGCTACT ACCTGAAGAA CGACCCGCTG TATTCGGCGC GTTTCACCGA CGTCTGGATG
TGGAAGGACG CTCCCACGAA CAACGGCCAC GACATCGGCA TCGATTTGGT CGCCCAGGAC
GCCGAGGACG GCAGCTACTG GGCCATCCAG TGCAAGTGCT ACGACGAGGA GTCGACGCTC
GACTACAAGA CGGTCTCCAC GTTCTTCGGA GCGCAGGGCA ACAACGACAC GTACGCGCAC
AACATGCTGA TCTCGACGAC GGAGAACCTG ACGCCGAACC TCGACAAGGT TCTGACCGAC
TGGAGCACCG TGCGGCTATT CCCTAGCGAG ATGGACCAGG CCGAGATTGA CTGGCAGCCG
TTCATCGAGG GCAAGGAAAT TGCCGAACGC AGTGTTTACG ACCCACTACC GCATCAAGAG
CGCGCCATCG AAGACTGCAT CCGAGGATTC AGTATTAGCG ACCGTGGCAA ACTCATTATG
GCCTGTGGAA CGGGCAAGAC GTTGACGAGC CTTAGGCTAA CTGAAAAGCT CGTCGGCAAA
GGTGGATTCA TATTGTTCCT AGCGCCTTCC ATTTCACTTG TCGGGCAATC GATGCGTGCA
TGGATTAATC AATCGAAATT GCCCATGAGG GTTGCCGTTG TCTGCTCAGA CGAGAAGGCG
TCATCTGTGG AGGGCGATAC TTGGGATACA TCCCTCAAGG ATTTACCATA TCCAGCTACG
ACGAACCCTG ATTTGCTCTT TGCGCAGATG AACAGGAAGA TTGCGTCCGA TGGATTGACG
GTTGTCTTTA GCACCTATCA GTCGATACAG GTTGTATCGG ATGCGCAAGC AATGGGATTG
CCAGAATTCG ATCTCGTCAT TTGCGACGAA GCGCACAGAA CAACGGGAGC CAAAGAAGCC
TCAGCTGCTA AAGAAGATAT TAGTCAGTAT GTAAAAGTGC ACGACAACAG CATCATCATT
GCGAAGAAGC GTTTGTATAT GACGGCTACG CCACGAATCT ATGGCGACAA CATCAAGAAA
GTCGCCAAAG CAGATGATTA TGTTGTTGCA TCAATGGATG ACGAAACGGT ATACGGCCCT
GAGTTCCATA GGTTGACGTT TGGCCAAGCC GTTGATGAGC AATTGCTCAC TGATTACAAA
GTTATCGCGC TCACCGTCAG CGAGAGCATG GTCGACGCCG TATATCAAAT GGCAATGGCT
GGTGACACTG GCTTTGAGAT TCCAGATGCA GCCAAGATTA TAGGGTGCTG GAAAGGACTG
CTAGACCAGG GTAGAAAAGA AGGAGGAACT CGCCTGAAGA ATGCGGTTGC ATTCTGTTCG
ACTATTCGCG AAAGCCAACG AATCGAGAAA TTCTTTACGC GGACAGTCGC CTCATACATA
AATTATGAAC GGGAAGAGAA AGGCGTAGAT CTTCCTGAAT TCTATTGCGA CATCCAGCAT
GTTGACGGGT CCATGAATGC GAAGGACCGC AAAGACAAGC TAGCTTGGTT GGCGGATGTC
GACGAAGAAC GGTGTCGAAT TCTATCTAAC GCTCGATGCC TAGCTGAAGG TATCGATGTC
CCGAATCTTG ATGCCGTATT ATTCCTCCAG CCGAAGAAAA GCCAAATCGA CATCATCCAA
GCCGTTGGTC GCGTTATGCG CAAGTTCGAG GGCAAGGAAT ACGGCTATAT CATTCTGCCC
ATAGTTGTTC CAGCGGGCAT GACTGCCGTC GAGGCACTCG ATGAAAGCGA GCCATATGCT
GTTGTATGGC AGGTCCTGAA GGCGCTGCGA AGCCACGATG AACGTCTGGA TGCAACTATC
AATGCCCTGC CTTACGACAA GGACGGTACT GGCAAAGACG TTGTCGATAT CATCGACCTG
GCACAACAGA TTGCCGAAGA AGAGGCAAAA GCGAAACACG AGCAGCTGAA GATTTACTTC
AGCGAACAAG AACTTCAGGA AGCCGTGAAC GCAATGATCG TCCGCAAATG CGGGACGAAA
GTCTATTGGG AAGAATGGGC AAAGGATATC GCCCAGATTG CGAAACGTCA CATTTCGCGC
ATTGAGGAAC TTGTGAGCAT TGGCGGTATT GCGCGAGAGC CGTTTGAAAG ATTCTTGAAA
GGGCTTCGTG ATTCGCTAAA TGACGGCATT ACCGAACCGG AAGCCGTCGA CATGCTCGCG
CAGCATATCA TCACGCTTCC TGTATTCGAA GCATTATTCC GAGGCGCACA GTTTGCGGAC
AGCAATCCGG TATCAATCGC AATGGAAAAG ATGATCGACG CCCTGCGTGA ATACACGCTC
GAGACGGAAG ACGAGAAAAG AGAACTTGCC GAACTATACC GCAGCGTGGA AATCAGAGCA
GAATCAATCC ACACCGACTC AGGCAGACAG AGGATCATCA AAGAATTGTA CGAAAAGTTC
TTCAGCCAGG CATTCACCAA GACGAGCGAA AAGATGGGAA TCGTCTACAC TCCCAACCAA
ATCGTCGATT TCATATTGCG ATCAACGAAT GCGCTTCTCC ATCACGAGTT CGGTCAAACA
TTCGCTGACG AAGGCGTGCA TATTCTCGAC CCGTTTACCG GAACGGGAAC GTTTATTGTA
AATCTGCTTA ACGACGACGC CCTCATGCCG AGCGACAAGA TTGAATACAA ATACGCTAAC
GAACTGCACT GCAATGAGAT TATGCTCTTG GCTTATTACA TTGCGACGAT CAACATCGAG
CACGCCTACC ATTCACGTAT CGAGGGAGAT TACATTCCCT TCCCTGGAGC AGTGTTGACC
GACACCTTCC AAATGACCGA AGAGGGAGAC CCTCTCGATC TCGAGGTTTT TACCCAGAAT
TCTAAACGCG TTGTAGAGCA AAACAGACTG CCGGTTCGAG TCATAATCGG CAATCCGCCT
TATTCAATCG GGCAGAAGAA CGCTAACGAC AACAACCAAA ACATGAAGTA CAAAACGCTT
GACGGAAGGA TATCTGACAC TTACGCGAAA CAGTCCGAAG CAGGACTGGT CAAGAGTCTT
TACGACCCAT ATATCAGGGC GTTCAGATGG TCGGGTGATC GTATAGGCGA CAGAGGCATA
ATCTGCTTTG TGACCAACTC AGGATGGCTC GATACGCGTA GCATGGATGG ATTCAGAAAA
GCGATGGAGG CCGAATACTC AACTGTTTAT ATCTACAATT TGCGCGGGAA TCAGAAGAGC
GTTAACTGGA AAGCTGAAGG CGGGAAAGTA TTCGGCAGCG GCTCTCAAGC TGGAATTGCT
ATTACAATGC TCGTCAAAAA CCCTGACCAT AAAGGACCTG CTGTCATCAA ATACCACGAA
GTGGCTGACG GTATGAGTGC AGAGGAAAAG CTCGAAGAGC TTTCTATCGC AACGTTTAAT
CCAGACGACG AAGGATTTTG GACTGTCATC AAGCCCAATG AGCTTGGCGA TTGGATTAAT
CAACGCGACA TTTCTTATGC AAGCTTCATT CCAATATATT CGGATGACGG ACGAGGTTTG
TTTAGCCGTA TTACGAATGG GGTGGTTACG AATCGCGACG CCTGGGCATA CAACTATTCC
AAAGAAAAAG TCGCAGCCAA TATGGCTAGG CTCATAGAGG CTTACAACGA TGAAACGGAT
AGATATCACA AGGCCGGAGC TCCGAGTGAT ATTCGCTCAT TTGTCGATAG CGATCCCGCC
CATATCAAGT GGACTCGTGG ATTGCTGGGC AAAGCAAAAC GCGGTAACAG ACTACGCTTC
AACAAGAAAC ACATTGTGTC ATCAGAGTAT CGACCCTTTT CAAAAAGATG GCTTTACTAT
TCACGAGACT TAAACGAAGT GCCCGGGCAA CAAGACACAT ATTTCGGAAT GACGAGAAAA
CGGAACCTTG CAATCGGATT CAATTCTCCT GGCTCAACAG AAAGCTTCGC ATTCATTGTT
GACAGAGTCG CGAATTCCTC TTTTGGCGGC AGCGAAGGAA GCCAGTGGGT TCCGCTTAAA
TGGTTTGAGA AACAAGAACC TTTAGGTGGG CTTTTTGGTA ATGATGAAGG TGGAATTATT
GAGCACGACG GAATAACTGA TTGGGCTCTC GAGAAGTTTA GGGCCGCCTA CGGCGACATT
ACGATAAGCA AGGATGACAT CTTCTACTAC GTATATGGAA TTCTAAACTC ACCAGAATAC
AAAGAACGAT TTGGCAATGA TCTTAAAAAA CAAATACCGA GAATACCGCT ATCAAAGCAT
TTCAAAGCTT TCTCTTCGGC TGGACGAAAG CTTGTAGAGC TTCACACTGG CTACGAAAAA
ATTGAACCAT ACCCGCTGAA AACGAACGTT CCTATTGTCT CCGGGAACAG CGAAGTGCGC
CAAATGAAAT TTGGAAAGCG CGCTGGCGAG AAAGACATGA CGCGCATCGT AGTGAATGAC
AAGGTCGTAA TAAGCGACAT ACCTCTTAAG GCATACGAAT ACCGCATTAA GGGCAGAAGT
GCGATTGAGT GGATTGTTAA AGAATACGCC GTACAAAGCG ATGTGAAAGG CAAATCGGGA
ATCGAGAACA ATCCGAACGA TTACTCAGAT GACCCTATGT ACATCATCGA TCTCTTGAAA
AAGGTTGTAA GGGTGTCGAT GGAGACGCTT GAGACACTAA GCACCCTGCC GCCCATCGAC
GAGATGGAAG AAGCTGATAA GTAA
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| Protein sequence | MASVTHITSR AHQPRGGYIN LERFDEHAFE DGLPFHGEYS IVPGTLGTTV DYLSRALLGF
SVKKAFEIAI MGAHIIGAKE TGYANDLANQ LQDAIDSGEL TDNDIRNAVR LARYDAAYRA
GAKSHNPNEG AEVDEKTVSD IRTLVRRTVS FFEENGPVVD AGITFEGGYG DVLDSGDADL
LTEDTLWDLK TSKDKPSPAD TLQLAVYYLL SLRSSKEEFK PIRKLGFYNP RLNKSWTIDV
LDLDEDVLDQ IQTDILGFEK HKAQRVNWSK EPSQTIYYVI DWIRDTAESE SDKGTKFERA
SRYYLKNDPL YSARFTDVWM WKDAPTNNGH DIGIDLVAQD AEDGSYWAIQ CKCYDEESTL
DYKTVSTFFG AQGNNDTYAH NMLISTTENL TPNLDKVLTD WSTVRLFPSE MDQAEIDWQP
FIEGKEIAER SVYDPLPHQE RAIEDCIRGF SISDRGKLIM ACGTGKTLTS LRLTEKLVGK
GGFILFLAPS ISLVGQSMRA WINQSKLPMR VAVVCSDEKA SSVEGDTWDT SLKDLPYPAT
TNPDLLFAQM NRKIASDGLT VVFSTYQSIQ VVSDAQAMGL PEFDLVICDE AHRTTGAKEA
SAAKEDISQY VKVHDNSIII AKKRLYMTAT PRIYGDNIKK VAKADDYVVA SMDDETVYGP
EFHRLTFGQA VDEQLLTDYK VIALTVSESM VDAVYQMAMA GDTGFEIPDA AKIIGCWKGL
LDQGRKEGGT RLKNAVAFCS TIRESQRIEK FFTRTVASYI NYEREEKGVD LPEFYCDIQH
VDGSMNAKDR KDKLAWLADV DEERCRILSN ARCLAEGIDV PNLDAVLFLQ PKKSQIDIIQ
AVGRVMRKFE GKEYGYIILP IVVPAGMTAV EALDESEPYA VVWQVLKALR SHDERLDATI
NALPYDKDGT GKDVVDIIDL AQQIAEEEAK AKHEQLKIYF SEQELQEAVN AMIVRKCGTK
VYWEEWAKDI AQIAKRHISR IEELVSIGGI AREPFERFLK GLRDSLNDGI TEPEAVDMLA
QHIITLPVFE ALFRGAQFAD SNPVSIAMEK MIDALREYTL ETEDEKRELA ELYRSVEIRA
ESIHTDSGRQ RIIKELYEKF FSQAFTKTSE KMGIVYTPNQ IVDFILRSTN ALLHHEFGQT
FADEGVHILD PFTGTGTFIV NLLNDDALMP SDKIEYKYAN ELHCNEIMLL AYYIATINIE
HAYHSRIEGD YIPFPGAVLT DTFQMTEEGD PLDLEVFTQN SKRVVEQNRL PVRVIIGNPP
YSIGQKNAND NNQNMKYKTL DGRISDTYAK QSEAGLVKSL YDPYIRAFRW SGDRIGDRGI
ICFVTNSGWL DTRSMDGFRK AMEAEYSTVY IYNLRGNQKS VNWKAEGGKV FGSGSQAGIA
ITMLVKNPDH KGPAVIKYHE VADGMSAEEK LEELSIATFN PDDEGFWTVI KPNELGDWIN
QRDISYASFI PIYSDDGRGL FSRITNGVVT NRDAWAYNYS KEKVAANMAR LIEAYNDETD
RYHKAGAPSD IRSFVDSDPA HIKWTRGLLG KAKRGNRLRF NKKHIVSSEY RPFSKRWLYY
SRDLNEVPGQ QDTYFGMTRK RNLAIGFNSP GSTESFAFIV DRVANSSFGG SEGSQWVPLK
WFEKQEPLGG LFGNDEGGII EHDGITDWAL EKFRAAYGDI TISKDDIFYY VYGILNSPEY
KERFGNDLKK QIPRIPLSKH FKAFSSAGRK LVELHTGYEK IEPYPLKTNV PIVSGNSEVR
QMKFGKRAGE KDMTRIVVND KVVISDIPLK AYEYRIKGRS AIEWIVKEYA VQSDVKGKSG
IENNPNDYSD DPMYIIDLLK KVVRVSMETL ETLSTLPPID EMEEADK
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