| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13970 |
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| Symbol | |
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| ID | 8395287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1599433 |
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| End bp | 1601004 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986151 |
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| Product | collagen triple helix repeat protein |
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| Protein accession | YP_003143767 |
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| Protein GI | 257064095 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCTACC CGGCAGCGAT GTGCGAGGCT GCTGGTGTCG TGGATGCGAG CATCATGTTG
TCGCTGGGCG ATGACCGCTA CTTTTCCACG CGCAACTTCA ACATCCGAGT CGAGAAGGTT
TTGATTGATG GTTTGGAACC CGAGGATGGG TTCACGCTGT TTGTGCAGGC CATTGCAGCA
TACGAGAATG CAGCGGACAT CAGCACGGAA GCCGCTGAGG CAGCCAATGA GGCGGCAGAG
GCGGCAAACC AAGCCGTTAG CGACTTGCAG GATGCCGCCC AGCGCGGGGA TTTCGATGGA
GCCGATGGCG CTGACGGGTT CAGCCCGACT GCCACTGTGA CGCAGACCGC CGATGGCGTG
ACCATTACCA TCACCGACAA GAACGGCACT ACGACGGCCG ATGTCTCTAA AGGCGCAAAG
GGAGACAAGG GCGATACCGG CGAGCAGGGT CCGAAAGGCG ACAAGGGTGA CACCGGAGAT
CGTGGACCTC AGGGAATTCA GGGTGAGACC GGACCCAAGG GAGATAAGGG CGATACAGGG
GCTACCGGTG CTCAGGGACC TAAAGGCGAA ACCGGAGAAA CGGGCGCAAC TGGTGCTACA
GGACCAAAGG GGCCAAAGGG TGATACGGGC GCACAGGGGC CGCAGGGCAT CCAGGGTGAA
ACAGGTCCCA AGGGCGAAAC CGGTGCGACT GGAGCAGCCG GCAGCGACGG CGTGAGCTGC
ACGCATTCGT GGAATGGAAC CGTGCTTTCC GTCACGAGCG CATCGGGCAC GAGCTCCGCC
GACCTTGTTG GGCCGCAGGG GCCAACCGGC GCTACAGGAG CTACGGGTCC CGCTGGCGCT
GACGGCACGA CATTCACTCC GCAGAACCCG CTTTCGCTTT CGAACGGCGA ACTATCCGTC
GATTTATCTG CAAACACGGA TACCCAGCAT TTAGCGCCGA CGTTCTGGCA GAAGTGGACT
TATCCGCGCC ACCCGGACAG CGAGGGCCGC TACTGGGTCT CGCTCGGGCA GGACACGAGT
CAGGGATACC GCTCATACGA CATGATCTTC AACGGGCAAT ATCGCGAGCT CGACGTGATA
ACGATGGTGT CGAAGAACAG CGGGTACGCG AGCGCGATCC TGCAGCGCGT GGCCGAGTTC
GGTTTGATGC GCAAGTTCGA GACGACCACC GACTTCGACG TAGACCCGGG CGATACGGAG
GCGGTGACGA TTCCTGCCGG TGACTTCTAC TCGGTGCCCG CCGACTGCGT CTTCCTGAAC
ACCACGACAG GCAACTTGAT GATTAACACC GCCGAAGCGG CTCCCGCCAG CAGAATCGCC
GCGACCTCTC TTACCGTGAC GGGGCTTTGC AACATATACG ACGTGGCTGC TGCATTCACG
GCATCGTCGC CGCTTTCGCT CTCCAACGGC GTGCTCTCGA TTGACCTCTC CGGTTATGCC
GCGCTTACGG GTGCCACATT CACTGGGGCC GTTTCGGGTA TCACACCGAC CGCTGATGCG
AACTTCGCCA CGAAGAAGTA CGTGGACGAC GCCATTGCCG CACTTGACGA CCTCTCGAAC
GAAAGCTTCT GA
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| Protein sequence | MFYPAAMCEA AGVVDASIML SLGDDRYFST RNFNIRVEKV LIDGLEPEDG FTLFVQAIAA
YENAADISTE AAEAANEAAE AANQAVSDLQ DAAQRGDFDG ADGADGFSPT ATVTQTADGV
TITITDKNGT TTADVSKGAK GDKGDTGEQG PKGDKGDTGD RGPQGIQGET GPKGDKGDTG
ATGAQGPKGE TGETGATGAT GPKGPKGDTG AQGPQGIQGE TGPKGETGAT GAAGSDGVSC
THSWNGTVLS VTSASGTSSA DLVGPQGPTG ATGATGPAGA DGTTFTPQNP LSLSNGELSV
DLSANTDTQH LAPTFWQKWT YPRHPDSEGR YWVSLGQDTS QGYRSYDMIF NGQYRELDVI
TMVSKNSGYA SAILQRVAEF GLMRKFETTT DFDVDPGDTE AVTIPAGDFY SVPADCVFLN
TTTGNLMINT AEAAPASRIA ATSLTVTGLC NIYDVAAAFT ASSPLSLSNG VLSIDLSGYA
ALTGATFTGA VSGITPTADA NFATKKYVDD AIAALDDLSN ESF
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